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Bump pypa/gh-action-pypi-publish from 1.8.10 to 1.8.11 #76

Bump pypa/gh-action-pypi-publish from 1.8.10 to 1.8.11

Bump pypa/gh-action-pypi-publish from 1.8.10 to 1.8.11 #76

Workflow file for this run

name: CI
# https://docs.github.com/en/actions/reference/workflow-syntax-for-github-actions#concurrency
# https://docs.github.com/en/developers/webhooks-and-events/events/github-event-types#pullrequestevent
concurrency:
group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.type }}
cancel-in-progress: true
on: [push, pull_request]
env:
CACHE_NUMBER: 0
jobs:
lint:
name: lint and style checks
runs-on: ubuntu-latest
steps:
- name: Checkout source
uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: "3.10"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install flake8 flake8-docstrings flake8-debugger flake8-bugbear pytest
- name: Install Pylibtiff
run: |
pip install -e .
- name: Run linting
run: |
flake8 libtiff/
test:
runs-on: ${{ matrix.os }}
continue-on-error: ${{ matrix.experimental }}
needs: [lint]
strategy:
fail-fast: true
matrix:
os: ["windows-latest", "ubuntu-latest", "macos-latest"]
python-version: ["3.8", "3.9", "3.10"]
experimental: [false]
system-libtiff: [false]
include:
- python-version: "3.11"
os: "ubuntu-latest"
experimental: true
system-libtiff: false
- python-version: "3.10"
os: "ubuntu-latest"
experimental: false
system-libtiff: true
env:
PYTHON_VERSION: ${{ matrix.python-version }}
OS: ${{ matrix.os }}
UNSTABLE: ${{ matrix.experimental }}
ACTIONS_ALLOW_UNSECURE_COMMANDS: true
steps:
- name: Checkout source
uses: actions/checkout@v3
- name: Setup Conda Environment
uses: conda-incubator/setup-miniconda@v2
with:
miniforge-variant: Mambaforge
miniforge-version: latest
use-mamba: true
python-version: ${{ matrix.python-version }}
activate-environment: pylibtiff
- name: Set cache environment variables
shell: bash -l {0}
run: |
echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV
CONDA_PREFIX=$(python -c "import sys; print(sys.prefix)")
echo "CONDA_PREFIX=$CONDA_PREFIX" >> $GITHUB_ENV
- uses: actions/cache@v3
with:
path: ${{ env.CONDA_PREFIX }}
key: ${{ matrix.os }}-${{matrix.python-version}}-conda-${{ hashFiles('.conda/environment.yml') }}-${{ env.DATE }}-${{matrix.experimental}}-${{ env.CACHE_NUMBER }}
id: cache
- name: Update environment
run: mamba env update -n pylibtiff -f .conda/environment.yml
if: steps.cache.outputs.cache-hit != 'true'
- name: Install unstable dependencies
if: matrix.experimental == true
shell: bash -l {0}
# We must get LD_PRELOAD for stdlibc++ or else the manylinux wheels
# may break the conda-forge libraries trying to use newer glibc versions
run: |
python -m pip install \
--index-url https://pypi.anaconda.org/scipy-wheels-nightly/simple/ \
--trusted-host pypi.anaconda.org \
--no-deps --pre --upgrade \
numpy;
LD_PRELOAD=$(python -c "import sys; print(sys.prefix)")/lib/libstdc++.so
echo "LD_PRELOAD=${LD_PRELOAD}" >> $GITHUB_ENV
- name: Install system libtiff
if: matrix.system-libtiff == true
shell: bash -l {0}
run: sudo apt-get install -y libtiff-dev
- name: Install conda libtiff
if: matrix.system-libtiff == false
shell: bash -l {0}
run: conda install -y libtiff
- name: Install pylibtiff
shell: bash -l {0}
run: |
python -m pip install --no-deps -e .
- name: Run unit tests
shell: bash -l {0}
run: |
export LD_PRELOAD=${{ env.LD_PRELOAD }};
pytest --cov=libtiff libtiff/tests
- name: Coveralls Parallel
uses: AndreMiras/coveralls-python-action@develop
with:
flag-name: run-${{ matrix.test_number }}
parallel: true
if: runner.os == 'Linux'
coveralls:
needs: [test]
runs-on: ubuntu-latest
steps:
- name: Coveralls Finished
uses: AndreMiras/coveralls-python-action@develop
with:
parallel-finished: true