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fix(summarize): pareto_frontier_genes -> top_mae_genes
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Signed-off-by: Cameron Smith <[email protected]>
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cameronraysmith committed Aug 6, 2024
1 parent 508f1ba commit d5c3896
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions src/pyrovelocity/tasks/summarize.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@
from beartype import beartype
from pandas import DataFrame

from pyrovelocity.analysis.analyze import pareto_frontier_genes
from pyrovelocity.analysis.analyze import top_mae_genes
from pyrovelocity.io import CompressedPickle
from pyrovelocity.logging import configure_logging
from pyrovelocity.plots import (
Expand Down Expand Up @@ -248,7 +248,7 @@ def summarize_dataset(
max(int(len(volcano_data) * 0.1), 4), 20, len(volcano_data)
)
logger.info(f"Searching for {number_of_marker_genes} marker genes")
putative_marker_genes = pareto_frontier_genes(
putative_marker_genes = top_mae_genes(
volcano_data=volcano_data,
num_genes=number_of_marker_genes,
)
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