Bug/book example fixes #199

Workflow file for this run

.github/workflows/rust-build-test.yaml at 9f45f9c

	name: 'Rust: Build and Test'

	on:
	push:
	branches:
	- main
	- master
	tags:
	- rust-*
	workflow_dispatch:
	pull_request:
	paths:
	- 'lace/**'
	- 'book/**'
	- '.github/workflows/rust-build-test.yaml'
	- '.github/scripts/run_code_in_mdfile.py'

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	env:
	CARGO_TERM_COLOR: always

	jobs:
	features:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v3

	- name: Set up Rust
	uses: dtolnay/rust-toolchain@stable

	- name: Cache Rust
	uses: Swatinem/rust-cache@v2
	with:
	workspaces: . -> lace/target

	- name: Install dependencies
	run: cargo install cargo-hack

	- name: Run cargo check on all features
	working-directory: lace
	run: cargo hack check --each-feature --all-targets

	lint:
	runs-on: ubuntu-latest
	defaults:
	run:
	working-directory: lace

	steps:
	- uses: actions/checkout@v3

	- name: Set up Rust
	uses: dtolnay/rust-toolchain@stable
	with:
	components: rustfmt, clippy

	- name: Cache Rust
	uses: Swatinem/rust-cache@v2
	with:
	workspaces: . -> lace/target

	- name: Run rustfmt
	working-directory: lace
	run: cargo fmt --all -- --check

	- name: Run clippy
	working-directory: lace
	env:
	RUSTFLAGS: -C debuginfo=0
	run: \|
	cargo clippy --all-features

	- name: Install audit
	run: cargo install cargo-audit

	- name: Run audit
	working-directory: lace
	# Note: Both `polars` and `arrow2` trigger this security violation
	# due to their reliance on `chrono`, which is the ultimate source of the violation
	# as of 2/21/23, no version of `chrono` has been published that fixes the issue
	# and thus neither `polars` or `arrow2` can pass `audit` checks
	run: cargo audit -f Cargo.lock --ignore RUSTSEC-2020-0071

	test:
	runs-on: ${{ matrix.os }}
	needs: ["lint", "features"]
	strategy:
	fail-fast: true
	matrix:
	os: [ubuntu-latest, windows-latest, macos-latest]
	defaults:
	run:
	working-directory: lace

	steps:
	- uses: actions/checkout@v3

	- name: Set up Rust
	uses: dtolnay/rust-toolchain@stable

	- name: Cache Rust
	uses: Swatinem/rust-cache@v2
	with:
	workspaces: . -> lace/target

	- name: Regen Examples
	env:
	RUSTFLAGS: -C debuginfo=0
	run: cargo run -- regen-examples

	- name: Run tests
	env:
	RUSTFLAGS: -C debuginfo=0
	run: cargo test

	# semver-checks:
	# runs-on: ubuntu-latest
	# needs: ["features", "lint", "test"]
	# steps:
	# - name: Checkout branch
	# uses: actions/checkout@v3
	# with:
	# path: branch

	# - name: Checkout master
	# uses: actions/checkout@v3
	# with:
	# ref: master
	# path: master

	# - name: Set up Rust
	# uses: dtolnay/rust-toolchain@stable

	# - name: Cache Rust
	# uses: Swatinem/rust-cache@v2
	# with:
	# workspaces: . -> lace/target

	# - name: Install extra cargo tools
	# run: cargo install cargo-semver-checks --locked

	# - name: Check for semver-incompatibilities
	# run: cargo semver-checks check-release --manifest-path branch/lace/Cargo.toml --baseline-root master/lace --verbose

	compile-benchmarks:
	runs-on: ubuntu-latest
	needs: ["features", "lint", "test"]
	steps:
	- uses: actions/checkout@v3

	- name: Set up Rust
	uses: dtolnay/rust-toolchain@stable

	- name: Compile benchmark tests (but do not run)
	uses: actions-rs/cargo@v1
	with:
	command: bench
	args: --manifest-path lace/Cargo.toml --no-run

	test-mdbook-rust:
	name: Test MDBook Rust Snippets
	runs-on: ubuntu-latest
	needs: ["features", "lint", "test"]
	steps:
	- uses: actions/checkout@v3

	- name: Install codedown
	run: npm install -g codedown

	- name: Set up Rust
	uses: dtolnay/rust-toolchain@stable

	- name: Cache Rust
	uses: Swatinem/rust-cache@v2
	with:
	workspaces: . -> lace/target

	- name: Install rust-script
	run: cargo install rust-script

	- name: Test MDBook Code Samples (Rust)
	env:
	FORCE_COLOR: 1
	run: \|
	pip install termcolor yq
	NEW_VERSION=$(tomlq -r .package.version < lace/Cargo.toml)
	python3 .github/scripts/run_code_in_mdfile.py directory rust book $NEW_VERSION --exclusion-file .github/resources/mdbook_exclusions.txt


	release:
	name: release
	runs-on: ubuntu-latest
	if: startsWith(github.ref, 'refs/tags/rust-')
	needs: ["compile-benchmarks", "features", "lint", "test", "test-mdbook-rust"]
	steps:
	- uses: actions/checkout@v3
	with:
	fetch-depth: 0
	- name: Check Branch
	env:
	NEW_VERSION: ${{github.ref_name}}
	run: \|
	git fetch origin master
	git tag --merged origin/master \| grep $NEW_VERSION
	- uses: dtolnay/rust-toolchain@stable
	- name: Check Semver
	working-directory: lace
	env:
	NEW_VERSION: ${{github.ref_name}}
	run: \|
	pip install yq
	DEPLOYING_VERSION=$(echo "$NEW_VERSION" \| perl -lpe 's/^rust-//')
	MAIN_VERSION=$(tomlq -r .package.version Cargo.toml)
	test "$DEPLOYING_VERSION" = "$MAIN_VERSION"
	- name: Install dependencies
	run: cargo install cargo-crate
	- name: Publish Updated Crates to Crates.io
	working-directory: lace
	env:
	CRATES_TOKEN: ${{ secrets.CRATES_TOKEN }}
	PACKAGE_ORDER: "lace_utils lace_consts lace_data lace_stats lace_codebook lace_geweke lace_cc lace_metadata lace"
	run: \|
	for PACKAGE_NAME in $PACKAGE_ORDER
	do
	echo "Processing package $PACKAGE_NAME"
	if [ "$PACKAGE_NAME" == 'lace' ]
	then
	CARGO_FILE="Cargo.toml"
	else
	CARGO_FILE="$PACKAGE_NAME/Cargo.toml"
	fi
	PACKAGE_VERSION=$(tomlq .package.version $CARGO_FILE)
	ALREADY_PUBLISHED=$(cargo crate info $PACKAGE_NAME --json --max-versions 100 \| jq '[.krate.versions[].num] \| any(. == '$PACKAGE_VERSION')')
	if [ "$ALREADY_PUBLISHED" == 'false' ]
	then
	cargo publish --token "${CRATES_TOKEN}" -p $PACKAGE_NAME --dry-run
	fi
	done

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Bug/book example fixes #199

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Bug/book example fixes #199

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