Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Profiling GaussianHMM with NumPyro backend #315

Closed
wants to merge 23 commits into from
Closed

Profiling GaussianHMM with NumPyro backend #315

wants to merge 23 commits into from

Commits on Feb 7, 2020

  1. switch to jax numpy

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    18a9a89 View commit details
    Browse the repository at this point in the history

  2. add jax to setup

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    0930a6c View commit details
    Browse the repository at this point in the history

  3. fix quote

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    1207968 View commit details
    Browse the repository at this point in the history

  4. fix hasing issue

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    46f0709 View commit details
    Browse the repository at this point in the history

  5. use onp.empty to inplace update data

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    e642ef4 View commit details
    Browse the repository at this point in the history

  6. fix align issue due to typo

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    7e5a403 View commit details
    Browse the repository at this point in the history

  7. fix remaining failing tests

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    9f6ff04 View commit details
    Browse the repository at this point in the history

  8. use numpy zeros instead of canonicalize_dtype

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    96fe974 View commit details
    Browse the repository at this point in the history

  9. increase jax version to resolve shape error

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    d51a470 View commit details
    Browse the repository at this point in the history

  10. use jax.numpy in numpy_log

    @fehiepsi
    fehiepsi committed Feb 7, 2020
    Configuration menu
    Copy the full SHA
    153408d View commit details
    Browse the repository at this point in the history

Commits on Feb 11, 2020

  1. use 2D cat when build block matrix

    @fehiepsi
    fehiepsi committed Feb 11, 2020
    Configuration menu
    Copy the full SHA
    50ba14a View commit details
    Browse the repository at this point in the history

  2. use cat instead of stack for profiling

    @fehiepsi
    fehiepsi committed Feb 11, 2020
    Configuration menu
    Copy the full SHA
    03ea202 View commit details
    Browse the repository at this point in the history

  3. lazy add two gaussians

    @fehiepsi
    fehiepsi committed Feb 11, 2020
    Configuration menu
    Copy the full SHA
    7c0d472 View commit details
    Browse the repository at this point in the history

Commits on Feb 12, 2020

  1. merge master

    @fehiepsi
    fehiepsi committed Feb 12, 2020
    Configuration menu
    Copy the full SHA
    980d7a0 View commit details
    Browse the repository at this point in the history

  2. merge cleanup

    @fehiepsi
    fehiepsi committed Feb 12, 2020
    Configuration menu
    Copy the full SHA
    ee99840 View commit details
    Browse the repository at this point in the history

  3. add a complete copy of pyro to numpyro to track down the changes for … 

    …future refactoring
    @fehiepsi
    fehiepsi committed Feb 12, 2020
    Configuration menu
    Copy the full SHA
    072e979 View commit details
    Browse the repository at this point in the history

  4. port distribution to numpyro

    @fehiepsi
    fehiepsi committed Feb 12, 2020
    Configuration menu
    Copy the full SHA
    f558451 View commit details
    Browse the repository at this point in the history

  5. port pyro.convert to numpyro

    @fehiepsi
    fehiepsi committed Feb 12, 2020
    Configuration menu
    Copy the full SHA
    7c9f6b7 View commit details
    Browse the repository at this point in the history

  6. support multi-backend for funsor.distributions

    @fehiepsi
    fehiepsi committed Feb 12, 2020
    Configuration menu
    Copy the full SHA
    c1a702e View commit details
    Browse the repository at this point in the history

  7. pass test_convert

    @fehiepsi
    fehiepsi committed Feb 12, 2020
    Configuration menu
    Copy the full SHA
    fba0d77 View commit details
    Browse the repository at this point in the history

Commits on Feb 13, 2020

  1. make hmm work

    @fehiepsi
    fehiepsi committed Feb 13, 2020
    Configuration menu
    Copy the full SHA
    ef63bad View commit details
    Browse the repository at this point in the history

  2. add missing files

    @fehiepsi
    fehiepsi committed Feb 13, 2020
    Configuration menu
    Copy the full SHA
    1ec1114 View commit details
    Browse the repository at this point in the history

Commits on Feb 14, 2020

  1. add some fixes

    @fehiepsi
    fehiepsi committed Feb 14, 2020
    Configuration menu
    Copy the full SHA
    1d53b03 View commit details
    Browse the repository at this point in the history