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46 Open 115 Closed
46 Open 115 Closed
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Issues list

Broken link in qiime diversity alpha parameter description. good first issue Good for newcomers
#349 opened Jan 31, 2024 by colinvwood
decouple file names and metadata column names
#345 opened Oct 26, 2023 by gregcaporaso
@lizgehret
enable output of group distances from beta-group-significance for plotting with q2-vizard
#342 opened Jun 23, 2023 by gregcaporaso
upgrade to adonis2
#328 opened May 24, 2022 by nbokulich
7
adonis: add option to ignore NaNs
#304 opened Feb 16, 2021 by nbokulich
Correct negative eigenvalues for PCoA on semi-metric distances
#302 opened Dec 15, 2020 by ChrisKeefe
IMP: Remember ticks in 'qiime diversity alpha-rarefaction' if metric changes
#295 opened Oct 13, 2020 by angrybee
UX Bug: beta allows RelativeFrequency, Type errors on RF with unsupported metrics
#296 opened Oct 2, 2020 by jkibilds
@ChrisKeefe
4
IMP: Save plots from qiime diversity alpha-rarefaction
#291 opened Aug 11, 2020 by angrybee
3
Handle weighted version of minkowski
#290 opened Aug 10, 2020 by ChrisKeefe
Reinstate mahalanobis
#289 opened Aug 10, 2020 by ChrisKeefe
@ChrisKeefe
Reinstate lladser_ci with improved handling of ci Results
#287 opened Aug 7, 2020 by ChrisKeefe
@ChrisKeefe
"Hand-build" test data for weighted unifrac
#267 opened Feb 7, 2020 by ChrisKeefe
@ChrisKeefe
Bray-Curtis: Data must be symmetric and cannot contain NaNs.
#262 opened Sep 5, 2019 by sjanssen2
2
adonis: enable pairwise adonis
#243 opened Mar 11, 2019 by nbokulich
adonis: expose strata parameter for nested designs
#242 opened Mar 11, 2019 by nbokulich
Validating the number of samples good first issue Good for newcomers
#241 opened Feb 26, 2019 by wasade
beta-group-significance: add r2 values for PERMANOVA tests
#227 opened Dec 14, 2018 by nbokulich
Pielou's Evenness can produce nan, causing downstream exceptions
#226 opened Dec 6, 2018 by wasade
3
beta: add Yue Clayton distance metric
#225 opened Nov 19, 2018 by nbokulich
beta-group-significance and others: add text describing stats output
#224 opened Nov 13, 2018 by nbokulich
filter alpha diversity artifact
#209 opened Jul 2, 2018 by antgonza
Forward slash in Metadata column label not escaped properly in alpha-rarefaction and alpha-group-significance type:bug Something is wrong.
#205 opened Jun 21, 2018 by thermokarst
1
BUG: alpha-correlation errors if metric name is also a metadata column type:bug Something is wrong.
#204 opened Jun 20, 2018 by nbokulich
1
forum feature request: compositional correlation
#198 opened May 25, 2018 by nbokulich
ProTip! Adding no:label will show everything without a label.