Merge pull request #167 from rcastelo/166-res-igsva-seem-not-work-whe…

…n-use-data-from-workspace fix issue by updating argument name used in shiny app
rcastelo · May 7, 2024 · 1bfb02a · 1bfb02a
2 parents 3280b36 + 2bdf403
commit 1bfb02a
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: GSVA
-Version: 1.53.0
+Version: 1.53.1
 Title: Gene Set Variation Analysis for Microarray and RNA-Seq Data
 Authors@R: c(person("Robert", "Castelo", role=c("aut", "cre"), email="[email protected]"),
              person("Justin", "Guinney", role="aut", email="[email protected]"),

diff --git a/inst/shinyApp/server.R b/inst/shinyApp/server.R
@@ -87,7 +87,7 @@ function(input, output, session) {
                           tau=isolate(argInp[["selectedTau"]]()),
                           maxDiff=isolate(argInp[["mxDiff"]]()),
                           absRanking=isolate(argInp[["absRanking"]]())))
-      result <- gsva(expr=param, verbose=TRUE)
+      result <- gsva(param=param, verbose=TRUE)
       sink()
       ## when gsva() ends, we reset the console text file to empty
       write("", file=rout)