Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

perf: perform matching over indices #443

Merged
merged 5 commits into from
Sep 17, 2024
Merged

perf: perform matching over indices #443

merged 5 commits into from
Sep 17, 2024

Conversation

jeswr
Copy link
Collaborator

@jeswr jeswr commented Sep 7, 2024

When creating a new dataset with #match do this over the indices rather than requiring the RDF/JS layer

Summary by CodeRabbit

  • New Features

    • Introduced a new function for advanced recursive matching in the dataset processing, enhancing the ability to match identifiers within store indexes.
  • Bug Fixes

    • Improved error handling when translating IRIs into internal IDs, ensuring more reliable dataset processing.
  • Tests

    • Expanded test suite to include precise matching checks for dataset quads, increasing the robustness and reliability of the tests.

Copy link
Contributor

coderabbitai bot commented Sep 7, 2024

Walkthrough

The changes introduce a new function, indexMatch, in the N3Store module, enhancing recursive matching capabilities within store indexes. The existing DatasetCoreAndReadableStream class is modified to incorporate this function, translating IRIs into internal IDs and populating the store's graphs based on matching results. Additionally, the test suite is updated to include new test cases that utilize namedNode for improved quad matching verification.

Changes

Files Change Summary
src/N3Store.js Added indexMatch function for recursive index matching; modified dataset processing logic.
test/N3Store-test.js Enhanced test suite with new DataFactory import and expanded test cases for quad matching.

Possibly related issues

Possibly related PRs

  • perf: compute intersection over indices #438: The intersect function added in this PR modifies the N3Store class similarly to how the indexMatch function does in the main PR, indicating a related enhancement in the functionality of the N3Store for handling complex data operations.

Poem

In the store where data hops,
A new function makes it stop,
Matching quads both near and far,
With indexMatch, we raise the bar!
Hooray for tests that now can see,
All the nodes, as bright as me! 🐇✨


Thank you for using CodeRabbit. We offer it for free to the OSS community and would appreciate your support in helping us grow. If you find it useful, would you consider giving us a shout-out on your favorite social media?

Share
Tips

Chat

There are 3 ways to chat with CodeRabbit:

  • Review comments: Directly reply to a review comment made by CodeRabbit. Example:
    -- I pushed a fix in commit <commit_id>, please review it.
    -- Generate unit testing code for this file.
    • Open a follow-up GitHub issue for this discussion.
  • Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
    -- @coderabbitai generate unit testing code for this file.
    -- @coderabbitai modularize this function.
  • PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
    -- @coderabbitai generate interesting stats about this repository and render them as a table.
    -- @coderabbitai read src/utils.ts and generate unit testing code.
    -- @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
    -- @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (Invoked using PR comments)

  • @coderabbitai pause to pause the reviews on a PR.
  • @coderabbitai resume to resume the paused reviews.
  • @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
  • @coderabbitai full review to do a full review from scratch and review all the files again.
  • @coderabbitai summary to regenerate the summary of the PR.
  • @coderabbitai resolve resolve all the CodeRabbit review comments.
  • @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
  • @coderabbitai help to get help.

Other keywords and placeholders

  • Add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.
  • Add @coderabbitai summary to generate the high-level summary at a specific location in the PR description.
  • Add @coderabbitai anywhere in the PR title to generate the title automatically.

CodeRabbit Configuration File (.coderabbit.yaml)

  • You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
  • Please see the configuration documentation for more information.
  • If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

  • Visit our Documentation for detailed information on how to use CodeRabbit.
  • Join our Discord Community to get help, request features, and share feedback.
  • Follow us on X/Twitter for updates and announcements.

Copy link
Contributor

@coderabbitai coderabbitai bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Actionable comments posted: 1

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between f71ef64 and 92d35ea.

Files selected for processing (2)
  • src/N3Store.js (2 hunks)
  • test/N3Store-test.js (3 hunks)
Additional comments not posted (2)
src/N3Store.js (1)

Line range hint 1009-1043: Review of DatasetCoreAndReadableStream class:

The modifications to integrate indexMatch into the DatasetCoreAndReadableStream class are well-implemented. The changes are aligned with the PR's objectives to optimize the matching process. Ensure comprehensive testing, especially for edge cases and large datasets, to validate the performance improvements.

Consider adding unit tests to cover edge cases and large datasets to ensure the performance improvements are as expected.

Verification successful

Tests for DatasetCoreAndReadableStream are present: The ./test/N3Store-test.js file contains tests for the DatasetCoreAndReadableStream class, which likely cover the integration of indexMatch. Ensure these tests are comprehensive and consider adding specific tests for indexMatch if needed.

  • File: ./test/N3Store-test.js
  • Tests: Various configurations of DatasetCoreAndReadableStream are tested, likely covering indexMatch indirectly.
Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify the performance of the `DatasetCoreAndReadableStream` class with large datasets.

# Test: Run performance tests and compare results with baseline.
echo "Running performance tests..."
# Note: Actual performance testing commands would depend on the project's testing framework.

Length of output: 66


Script:

#!/bin/bash
# Search for existing tests related to the DatasetCoreAndReadableStream class or indexMatch function.
echo "Searching for tests related to DatasetCoreAndReadableStream or indexMatch..."

# Find test files that might contain tests for DatasetCoreAndReadableStream
fd -e js -e ts -e jsx -e tsx -e mjs -e cjs -e coffee -e litcoffee -e iced -e ls -e es -e es6 -e esm -e mjsx -e cjsx -e litcjsx -e icedjsx -e lscjsx -e esjsx -e es6jsx -e esmjsx -e mjs -e cjs -e coffee -e litcoffee -e iced -e ls -e es -e es6 -e esm -e mjsx -e cjsx -e litcjsx -e icedjsx -e lscjsx -e esjsx -e es6jsx -e esmjsx -e test.js -e spec.js -e test.ts -e spec.ts -e test.jsx -e spec.jsx -e test.tsx -e spec.tsx -e test.mjs -e spec.mjs -e test.cjs -e spec.cjs -e test.coffee -e spec.coffee -e test.litcoffee -e spec.litcoffee -e test.iced -e spec.iced -e test.ls -e spec.ls -e test.es -e spec.es -e test.es6 -e spec.es6 -e test.esm -e spec.esm -e test.mjsx -e spec.mjsx -e test.cjsx -e spec.cjsx -e test.litcjsx -e spec.litcjsx -e test.icedjsx -e spec.icedjsx -e test.lscjsx -e spec.lscjsx -e test.esjsx -e spec.esjsx -e test.es6jsx -e spec.es6jsx -e test.esmjsx -e spec.esmjsx --exec rg -l 'DatasetCoreAndReadableStream|indexMatch' {}

Length of output: 1147


Script:

#!/bin/bash
# Examine the implementation of indexMatch to understand its functionality.
echo "Searching for the implementation of indexMatch..."

# Use ast-grep to find the implementation of indexMatch
ast-grep --lang javascript --pattern 'function indexMatch($$$) { $$$ }'

Length of output: 910


Script:

#!/bin/bash
# Search within the identified test file for tests related to DatasetCoreAndReadableStream or indexMatch.
echo "Searching for specific tests in ./test/N3Store-test.js..."

# Use rg to search for test cases related to DatasetCoreAndReadableStream or indexMatch
rg 'DatasetCoreAndReadableStream|indexMatch' ./test/N3Store-test.js -A 5 -B 5

Length of output: 708

test/N3Store-test.js (1)

5-5: Verify the import and usage of DataFactory.

The import of DataFactory and the destructuring of namedNode are new additions. Ensure that DataFactory is correctly exported from the source module and that namedNode is used appropriately in the tests.

Also applies to: 17-17

src/N3Store.js Show resolved Hide resolved
Copy link
Contributor

@coderabbitai coderabbitai bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between 92d35ea and addf2f8.

Files selected for processing (2)
  • src/N3Store.js (2 hunks)
  • test/N3Store-test.js (3 hunks)
Files skipped from review as they are similar to previous changes (2)
  • src/N3Store.js
  • test/N3Store-test.js

@jeswr jeswr marked this pull request as draft September 8, 2024 10:59
src/N3Store.js Outdated
Comment on lines 1029 to 1031
/**
* Performs matching over the store indexes
*/
Copy link
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Shoud add similar docs to #438 around falsy values

Comment on lines +1073 to +1078
const subjects = indexMatch(graphs[graph].subjects, [subjectId, predicateId, objectId]);
if (subjects) {
newStore._graphs[graph] = {
subjects,
predicates: indexMatch(graphs[graph].predicates, [predicateId, objectId, subjectId]),
objects: indexMatch(graphs[graph].objects, [objectId, subjectId, predicateId]),
Copy link
Collaborator Author

@jeswr jeswr Sep 8, 2024

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

We could optimise slightly further by using the same technique as #readQuads to determine which index to match over first as this will be more efficient for identifying if there are no matches. But it would be sufficient to leave that work for a follow up PR.

src/N3Store.js Outdated Show resolved Hide resolved
Copy link
Contributor

@coderabbitai coderabbitai bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Actionable comments posted: 0

Outside diff range, codebase verification and nitpick comments (1)
src/N3Store.js (1)

Line range hint 1053-1087: Approve modifications in DatasetCoreAndReadableStream.

The modifications in the DatasetCoreAndReadableStream class effectively incorporate the new indexMatch function to enhance dataset processing. The translation of IRIs into internal numeric IDs and the subsequent use of indexMatch are well-implemented. Consider further optimizations in future updates, as suggested in previous comments, to improve efficiency further.

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between addf2f8 and 2020c3f.

Files selected for processing (2)
  • src/N3Store.js (2 hunks)
  • test/N3Store-test.js (3 hunks)
Files skipped from review as they are similar to previous changes (1)
  • test/N3Store-test.js
Additional comments not posted (1)
src/N3Store.js (1)

1037-1052: Enhance robustness of indexMatch function.

The indexMatch function introduces a recursive approach to optimize matching over indices. While the implementation appears efficient for the intended use case, consider adding error handling for unexpected inputs or data types to enhance robustness. Additionally, verify that this function integrates seamlessly with other parts of the system, especially where it's used in the DatasetCoreAndReadableStream class.

Run the following script to verify the function usage:

Verification successful

Confirm integration and enhance error handling for indexMatch function.

The indexMatch function is correctly integrated within src/N3Store.js, with multiple calls using different identifiers. To further improve the function's robustness, consider adding error handling for unexpected inputs or data types. This will ensure the function handles edge cases gracefully and maintains system stability.

  • File: src/N3Store.js
  • Lines: 1037-1052
Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify all function calls to `indexMatch` match the new signature.

# Test: Search for the function usage. Expect: Only occurrences of the new signature.
rg --type python -A 5 $'indexMatch'

Length of output: 65


Script:

#!/bin/bash
# Description: Verify all function calls to `indexMatch` in JavaScript files.

# Test: Search for the function usage in JavaScript files.
rg --type js -A 5 'indexMatch'

Length of output: 1149

@jeswr jeswr enabled auto-merge (squash) September 17, 2024 08:05
@jeswr jeswr disabled auto-merge September 17, 2024 08:06
@jeswr jeswr merged commit b0361a0 into main Sep 17, 2024
16 checks passed
@jeswr jeswr deleted the perf/index-match branch September 17, 2024 08:06
Copy link

🎉 This PR is included in version 1.21.2 🎉

The release is available on:

Your semantic-release bot 📦🚀

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant