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limony

lake itag measurements over nineteen years

Please cite: Rohwer & McMahon. Lake iTag measurements over nineteen years, introducing the limony dataset. bioRxiv. 2022

This repo contains scripts that were used to process the limony dataset, and also a package. Loading the package provides both the limony data and functions for subsetting its nested list structure.

To load the package, first make sure you have the pre-requisites installed:

install.packages("devtools")
install.packages("lubridate")

Now install the limony package like so:

devtools::install_github("rrohwer/limony", build_vignettes = TRUE)

Find the limony dataset and directions with:

library(limony)
data("limony")
browseVignettes(package = "limony")

Or browse the vignette here: introduction

Contact:
[email protected]
twitter: @RobinRohwer

You may also be interested in what we have done with limony:
Rohwer et al. Species invasions shift microbial phenology in a two-decade freshwater time series. PNAS. 2023