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rupertoverall/README.md

I am a scientist researching the genetics behind brain ageing. I work in the fields of quantitative genetics, multimetric behaviour analysis and systems biology. Several open source software projects and the analysis code for some of my published papers are hosted here.

I am the author of the R package Rtrack (on CRAN; development version/source here). I am also the author of the R package ColonyTrack (source here).

I maintain several web projects including COVIDminer and NeurogenesisMiner (text mining resources to aid curation of molecular pathway maps) as well as the Mammalian Adult Neurogenesis Gene Ontology.

I can be found on Mastodon at https://fosstodon.org/@rupertoverall.

Popular repositories Loading

  1. Rtrack Rtrack Public

    Analysis of spatial tracking data and strategy classification.

    R 6 2

  2. COVIDminer COVIDminer Public

    An interactive text mining tool to assist curation of Sars-CoV-2 interaction pathways

    2

  3. ColonyTrack ColonyTrack Public

    Analysis of Multi-Subject Tracking Data from Interconnected Cage Networks

    R 2

  4. NeurogenesisMiner NeurogenesisMiner Public

    An interactive text mining tool to assist curation of interaction pathways important in adult neurogenesis

    1

  5. COVIDminerAPI COVIDminerAPI Public

    Tools to query COVIDminer database through its API from within R.

    R 1

  6. CDFSnipeR CDFSnipeR Public

    An R package to remove probes from microarray CDF files