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Merge benchmark devel branch #17

Merged
merged 36 commits into from
Sep 1, 2022
Merged

Merge benchmark devel branch #17

merged 36 commits into from
Sep 1, 2022

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PauBadiaM
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demian1 and others added 30 commits July 13, 2022 16:05
Implemented a whole-dataset benchmark module (not individual target performances) and associated plotting functions. Currently only roc and prc AUCs are implemented as performance metrics.
Added per target performance estimation
changed some plotting functions
added performance measure on positive and negative perturbations separately
added class imbalance as an output
corrected how positive and negative performances were computed
- added arguments of all functions wrapped by run_benchmark
- added run_benchmark to decouple import
added functionality to group and compute performance by any column in the metadata (group experiments)
Added benchmark functions to decoupler
@PauBadiaM PauBadiaM merged commit 22d6095 into main Sep 1, 2022
@PauBadiaM PauBadiaM deleted the devel branch September 1, 2022 13:25
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