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Check minimum computable wavelength in tutorial 1 (Capytaine v2) #478

Check minimum computable wavelength in tutorial 1 (Capytaine v2)

Check minimum computable wavelength in tutorial 1 (Capytaine v2) #478

Workflow file for this run

name: Build and Test
# 1. Build and test WecOptTool
# - check that WecOptTool builds on a matrix of OS + Python versions
# - check that all tests pass on the same matrix
# - report the test code coverage
# 2. Check that the documentation builds correctly
on:
push:
branches: [ main ]
pull_request:
branches: [ main ]
jobs:
wecopttool_test:
name: Build (${{ matrix.python-version }}, ${{ matrix.os }})
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest", "macos-latest", "windows-latest"]
python-version: ["3.10", "3.11"] # CHANGE: Python version
steps:
# Checkout the WecOptTool repo
- uses: actions/checkout@v3
# Cache the conda environment >>>
# The cache key includes the OS, the date, the hash of the pyproject.toml file, and the cache number.
# A new cache is created if:
# - this is the first time today that this file is run (date changes)
# - the content of pyproject.toml changes
# - you manually change the value of the CACHE_NUMBER below
# Else the existing cache is used.
- name: Setup Mambaforge
uses: conda-incubator/setup-miniconda@v2
with:
miniforge-variant: Mambaforge
miniforge-version: latest
activate-environment: test-env
use-mamba: true
# save the date to include in the cache key
- name: Get Date
id: get-date
run: echo "DATE=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_ENV
shell: bash
# create a conda yaml file
# for some reason Windows installs capytaine 1.4 instead of latest.
# CHANGE: Capytaine version
- name: Create environment.yml file
run: |
echo "name: test-env" >> environment.yml;
echo " " >> environment.yml
echo "dependencies:" >> environment.yml
echo " - python=${{ matrix.python-version }}" >> environment.yml
echo " - capytaine=1.5" >> environment.yml
echo " - wavespectra" >> environment.yml
cat environment.yml
# use the cache if it exists
- uses: actions/cache@v3
env:
CACHE_NUMBER: 0 # increase to reset cache manually
with:
path: ${{ env.CONDA }}/envs
key: conda-${{ runner.os }}--${{ runner.arch }}--${{ env.DATE }}-${{ hashFiles('pyproject.toml') }}-${{ env.CACHE_NUMBER }}
id: cache
# if cache key has changed, create new cache
- name: Update environment
run: mamba env update -n test-env -f environment.yml
if: steps.cache.outputs.cache-hit != 'true'
# <<< Cache the conda environment
# install libglu on ubuntu.
- name: Install libglu
if: matrix.os == 'ubuntu-latest'
run: sudo apt-get install libglu1
# install WecOptTool, pytest/coveralls, and gmsh/pygmsh
- name: Install WecOptTool
shell: bash -l {0}
run: |
conda activate test-env
python3 -m pip install --upgrade pip
pip3 install gmsh pygmsh
pip3 install coveralls pytest
pip3 install .
# run all tests & coverage
- name: Run Test
shell: bash -l {0}
run: coverage run -m pytest
# upload coverage data
- name: Upload coverage data to coveralls.io
shell: bash -l {0}
run: coveralls --service=github
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
COVERALLS_FLAG_NAME: ${{ matrix.os }}-${{ matrix.python-version }}
COVERALLS_PARALLEL: true
coveralls:
name: Indicate completion to coveralls.io
needs: wecopttool_test
runs-on: ubuntu-latest
container: python:3-slim
steps:
- name: Finished
run: |
pip3 install --upgrade coveralls
coveralls --finish
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
documentation_test:
name: Build documentation
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: '3.11' # CHANGE: Python version
- name: Install dependencies
run: sudo apt-get install libglu1 pandoc gifsicle
- name: Install WecOptTool for documentation
shell: bash -l {0}
run: |
python3 -m pip install --upgrade pip
pip3 install wheel coveralls netCDF4
pip3 install .[dev,geometry]
- name: Build documentation
shell: bash -l {0}
run: |
python3 docs/build_docs.py