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Fix view behavior for AwkwardArrays #1070

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Fix view behavior for AwkwardArrays #1070

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Commits on Jul 24, 2023

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Commits on Jul 25, 2023

  1. Fix views of views

    grst committed Jul 25, 2023
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  2. Update anndata/_core/views.py

    Co-authored-by: Angus Hollands <[email protected]>
    grst and agoose77 authored Jul 25, 2023
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Commits on Aug 30, 2023

  1. Remove all custom code for views

    grst committed Aug 30, 2023
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Commits on Sep 1, 2023

  1. WIP add test cases

    grst committed Sep 1, 2023
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  4. More test cases

    grst committed Sep 1, 2023
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  5. Add comment about view behavior

    grst committed Sep 1, 2023
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Commits on Sep 7, 2023

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Commits on Sep 8, 2023

  1. Fix akward array view test

    The test didn't catch that when modifying an awkward array in a
    AnnDataView, the changes did not persist within that view.
    
    The issue was that I had been retreiving the awkward array
    from the view once, and then did tests on it. Instead, to properly
    test this, I need to retreive the Awkward array from the AnnData view
    every time. It turns out doing so gives me a fresh copy of the origina
    awkward array and modifications only affect that copy - not the original data.
    grst committed Sep 8, 2023
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  2. Fix that awkward arrays in an awyward array view could not be modified.

    I solved the issue described in the previous commit by adding
    logic to `AlignedViewMixin` that can copy objects of a certain type
    (for now only awkward arrays) upon view creation.
    grst committed Sep 8, 2023
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