Update notebooks with the upcoming changes in v0.3 #130
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| name: Package dev versions | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install uv | |
| uv venv | |
| source .venv/bin/activate | |
| uv pip install ruff pytest | |
| uv pip install .[dev,docs,test] | |
| - name: Install dev versions | |
| run: | | |
| source .venv/bin/activate | |
| uv pip install -U git+https://github.com/scverse/anndata | |
| uv pip install -U git+https://github.com/scverse/scanpy | |
| - name: Test with pytest | |
| run: | | |
| source .venv/bin/activate | |
| pytest |