Skip to content

Package dependency pins & test #6

Package dependency pins & test

Package dependency pins & test #6

name: python-tiledbsoma-ml past tiledbsoma compat # Latest tiledbsoma version covered by another workflow
on:
pull_request:
branches: ["*"]
paths-ignore:
- "scripts/**"
push:
branches: [main]
paths-ignore:
- "scripts/**"
jobs:
unit_tests:
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest", "macos-latest"]
python-version: ["3.9", "3.10", "3.11", "3.12"]
pkg-version:
- "tiledbsoma~=1.9.0 'numpy<2.0.0'"
- "tiledbsoma~=1.10.0 'numpy<2.0.0'"
- "tiledbsoma~=1.11.0"
- "tiledbsoma~=1.12.0"
- "tiledbsoma~=1.13.0"
- "tiledbsoma~=1.14.0"
exclude: # TODO: remove mac-os/3.12 exclusion when tiledbsoma supports it
- python-version: 3.12
os: macos-latest
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: pip
- name: Install prereqs
run: |
pip install --upgrade pip pytest setuptools
pip install ${{ matrix.pkg-version }} .
- name: Run tests
run: pytest -v tests