Misc doc fixes

docs/platforms/gradle/architecture.md

@@ -38,14 +38,14 @@ Its responsibilities include:
 - Running standard subproject configurations via `StandardProjectConfigurations`.
 - Configuring unit tests via `UnitTests`. This also includes configuring the Gradle test retry plugin, if enabled.
 - Configuring NullAway, if enabled.
-- Configuring [Skippy](/tools/skippy).
-- Configuring [Mod Score](../mod-score) tasks.
+- Configuring [Skippy](../../tools/skippy.md).
+- Configuring [Mod Score](mod-score.md) tasks.
 
 ### `StandardProjectConfigurations`
 
 This class warrants special mention as it is responsible for the bulk of the configuration applied to projects SGP manages.
 
-- Creates and exposes the [`foundry` extension DSL](../dsl).
+- Creates and exposes the [`foundry` extension DSL](dsl.md).
 - Applies common configurations.
   - This largely just sets up the dependency sorter plugin.
 - Applies common JVM configurations.
@@ -59,7 +59,7 @@ All JVM projects (Android, Java, Kotlin) receive some common configuration for t
 
 - Applies the repo's platform project, if any.
 - Applies any BOM dependencies to platform-configurable configurations.
-- Configures the dependency analysis gradle plugin and [`DependencyRake`](../dependency-rake).
+- Configures the dependency analysis gradle plugin and [`DependencyRake`](dependency-rake.md).
 - Applies common annotations and common test bundles from version catalogs.
 - Fails on non-androidx support library dependencies.
 - Configure common annotations processors.
@@ -78,7 +78,7 @@ Java projects are fairly simple. Note that these are applied on all projects tha
 
 ##### Android
 
-- Configures AndroidTest APK aggregation with [Skippy](/tools/skippy) support.
+- Configures AndroidTest APK aggregation with [Skippy](../../tools/skippy.md) support.
 - Applies the [Android cache fix plugin](https://github.com/gradle/android-cache-fix-gradle-plugin), if enabled.
 - Configures common AGP extensions (both legacy extensions and new Component extensions).
   - Disables unused/irrelevant variants. SGP is single-variant for library projects by default.
@@ -96,7 +96,7 @@ Java projects are fairly simple. Note that these are applied on all projects tha
 - Application projects...
   - have their packaging config set up with some convenience common exclusions and handling common `jniLibs` handling.
   - have v3 and v4 signing enabled by default.
-  - are configured with [`PermissionChecks`](../utilities/#permissionchecks).
+  - are configured with [`PermissionChecks`](utilities.md#permissionchecks).
   - are configured with the Bugsnag gradle plugin, if enabled.
 - Library projects...
   - are configured with an automatic `android.namespace`, if none is manually specified in the buildscript. The namespace is inferred from the project's Gradle path.

docs/platforms/gradle/dsl.md

@@ -73,7 +73,7 @@ behavior.
 
 By default, SGP disables androidTests in projects. These can be enabled via the `androidTest()` feature, which will enable the relevant controls in the Android plugin. This can also accept specified variants to enable/disable.
 
-This is important for opting in tests to [AndroidTest APK Aggregation](../utilities/#androidtest-apk-aggregation).
+This is important for opting in tests to [AndroidTest APK Aggregation](utilities.md#androidtest-apk-aggregation).
 
 ### Resources
 
@@ -85,5 +85,5 @@ This can be enabled via the `resources()` feature, which will enable the relevan
 
 ### Permission AllowList
 
-This enables checking of a permission allowlist. See [`PermissionChecks`](../utilities/#permissionchecks) for more
+This enables checking of a permission allowlist. See [`PermissionChecks`](utilities.md#permissionchecks) for more
 details.

docs/platforms/gradle/utilities.md

@@ -40,7 +40,7 @@ tasks
 ```
 
 This task is automatically added to whenever a subproject uses
-the `androidTest()` [DSL feature](../dsl/#android-test).
+the `androidTest()` [DSL feature](dsl.md#android-test).
 
 ## `PermissionChecks`
 
@@ -51,7 +51,7 @@ The workflow we use at Slack is like this:
 
 - We check in a `permissionsAllowlist.txt` file in the Slack android repo.
 - This file is owned in GitHub by a specific codeowner rule that adds a permission reviewers group.
-- This file is passed into the `allowListFile` [DSL feature](../dsl/#permission-allowlist) in the application
+- This file is passed into the `allowListFile` [DSL feature](dsl.md#permission-allowlist) in the application
   project.
 - On each build, SGP automatically checks that the permissions present in the release APK manifest match the ones
   defined in the allowlist.

mkdocs.yml

@@ -76,6 +76,8 @@ nav:
     #  - 'Thermals Logging': platforms/gradle/thermals-logging.md
   - 'Tools':
       - 'CLI': tools/cli.md
+      # TODO
+    #  - 'Skippy': tools/skippy.md
   - 'Discussions ⏏': https://github.com/slackhq/foundry/discussions
   - 'Change Log': changelog.md
   - 'API': api/0.x/