perf: autobump bio/kallisto/quant

[snakedeploy-bot]

Automatic bump of bio/kallisto/quant.

Summary by CodeRabbit

• New Features

  • Updated the kallisto package to version 0.51.0, which may include new functionalities and improvements.

• Bug Fixes

  • Upgraded multiple library dependencies to their latest versions, enhancing performance and security.

[coderabbitai]

Important

Review skipped

Bot user detected.

To trigger a single review, invoke the @coderabbitai review command.

You can disable this status message by setting the reviews.review_status to false in the CodeRabbit configuration file.

Walkthrough

The update involves changing the version of the kallisto package from 0.50.1 to 0.51.0 and upgrading several library dependencies in the environment configuration files. These changes reflect a maintenance update aimed at keeping the environment current with the latest library versions.

Changes

Files	Change Summary
bio/kallisto/quant/environment.linux-64.pin.txt	Updated kallisto from 0.50.1 to 0.51.0. Upgraded library dependencies to their latest versions.
bio/kallisto/quant/environment.yaml	Updated kallisto from 0.50.1 to 0.51.0.

---

🪧 Tips

Chat

There are 3 ways to chat with CodeRabbit:

• Review comments: Directly reply to a review comment made by CodeRabbit. Example:
  • I pushed a fix in commit <commit_id>, please review it.
  • Generate unit testing code for this file.
  • Open a follow-up GitHub issue for this discussion.
• Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
  • @coderabbitai generate unit testing code for this file.
  • @coderabbitai modularize this function.
• PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
  • @coderabbitai gather interesting stats about this repository and render them as a table. Additionally, render a pie chart showing the language distribution in the codebase.
  • @coderabbitai read src/utils.ts and generate unit testing code.
  • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
  • @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (Invoked using PR comments)

• @coderabbitai pause to pause the reviews on a PR.
• @coderabbitai resume to resume the paused reviews.
• @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
• @coderabbitai full review to do a full review from scratch and review all the files again.
• @coderabbitai summary to regenerate the summary of the PR.
• @coderabbitai resolve resolve all the CodeRabbit review comments.
• @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
• @coderabbitai help to get help.

Other keywords and placeholders

• Add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.
• Add @coderabbitai summary to generate the high-level summary at a specific location in the PR description.
• Add @coderabbitai anywhere in the PR title to generate the title automatically.

CodeRabbit Configuration File (.coderabbit.yaml)

• You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
• Please see the configuration documentation for more information.
• If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

• Visit our Documentation for detailed information on how to use CodeRabbit.
• Join our Discord Community to get help, request features, and share feedback.
• Follow us on X/Twitter for updates and announcements.

[coderabbitai]

Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between 5de2293 and eba1ced.

Files selected for processing (2)

• bio/kallisto/quant/environment.linux-64.pin.txt (1 hunks)
• bio/kallisto/quant/environment.yaml (1 hunks)

Files skipped from review due to trivial changes (1)

• bio/kallisto/quant/environment.linux-64.pin.txt

Additional comments not posted (1)

bio/kallisto/quant/environment.yaml (1)

6-6: Verify compatibility of the updated kallisto version.

The kallisto dependency has been updated to version 0.51.0. Ensure that this version is compatible with other dependencies in the environment and that it does not introduce any breaking changes.

Consider running the following script to check for compatibility issues: