v3.3.7
Bug Fixes
Performance Improvements
- autobump bio/bbtools (#2627) (7f5b520)
- autobump bio/diamond/blastp (#2630) (3911776)
- autobump bio/diamond/blastx (#2629) (faf5de8)
- autobump bio/diamond/makedb (#2628) (7ddca67)
- autobump bio/encode_fastq_downloader (#2682) (eb4a093)
- autobump bio/fgbio/collectduplexseqmetrics (#2631) (7a58ee9)
- autobump bio/galah (#2670) (8972be1)
- autobump bio/gatk/applybqsr (#2662) (2d1ff8e)
- autobump bio/gatk/applybqsrspark (#2669) (46a8acd)
- autobump bio/gatk/baserecalibratorspark (#2651) (3b4f517)
- autobump bio/gatk/calculatecontamination (#2673) (056c9a0)
- autobump bio/gatk/callcopyratiosegments (#2655) (b1932ae)
- autobump bio/gatk/cleansam (#2660) (3802099)
- autobump bio/gatk/collectreadcounts (#2666) (0aa2cce)
- autobump bio/gatk/combinegvcfs (#2686) (a903745)
- autobump bio/gatk/denoisereadcounts (#2685) (1e8498b)
- autobump bio/gatk/depthofcoverage (#2658) (1f43492)
- autobump bio/gatk/estimatelibrarycomplexity (#2650) (e9395ff)
- autobump bio/gatk/filtermutectcalls (#2684) (b239e62)
- autobump bio/gatk/genomicsdbimport (#2665) (a38b278)
- autobump bio/gatk/getpileupsummaries (#2657) (7523193)
- autobump bio/gatk/learnreadorientationmodel (#2653) (773e78c)
- autobump bio/gatk/leftalignandtrimvariants (#2656) (183950c)
- autobump bio/gatk/markduplicatesspark (#2659) (706cda3)
- autobump bio/gatk/modelsegments (#2663) (bc40698)
- autobump bio/gatk/mutect (#2661) (0e1d98a)
- autobump bio/gatk/scatterintervalsbyns (#2674) (e49b027)
- autobump bio/gatk/splitintervals (#2667) (332eed5)
- autobump bio/gatk/splitncigarreads (#2672) (dabbc1e)
- autobump bio/gatk/variantannotator (#2664) (2142589)
- autobump bio/gatk/varianteval (#2654) (9d4ffea)
- autobump bio/gatk/variantfiltration (#2668) (5cf5407)
- autobump bio/gatk/variantrecalibrator (#2652) (714ae91)
- autobump bio/gatk3/printreads (#2683) (c15b388)
- autobump bio/gatk3/realignertargetcreator (#2671) (103425a)
- autobump bio/igv-reports (#2641) (4bac92e)
- autobump bio/infernal/cmpress (#2676) (7e690c7)
- autobump bio/infernal/cmscan (#2675) (89eac39)
- autobump bio/jellyfish/count (#2643) (68d8bd6)
- autobump bio/jellyfish/dump (#2645) (d3823f8)
- autobump bio/jellyfish/histo (#2642) (26c3123)
- autobump bio/jellyfish/merge (#2644) (2acb46b)
- autobump bio/last/lastal (#2632) (0090d1a)
- autobump bio/last/lastal (#2646) (aecf702)
- autobump bio/last/lastal (#2687) (c252386)
- autobump bio/last/lastdb (#2633) (0adfac7)
- autobump bio/last/lastdb (#2647) (9797636)
- autobump bio/last/lastdb (#2688) (3dec479)
- autobump bio/multiqc (#2677) (197ef10)
- autobump bio/seqkit (#2635) (8ed8105)
- autobump bio/sourmash/compute (#2678) (1ba1a52)
- autobump bio/spades/metaspades (#2689) (35e4c20)
- autobump bio/star/align (#2634) (0cb085a)
- autobump bio/star/index (#2636) (e8df2fe)
- autobump bio/ucsc/gtfToGenePred (#2679) (20682f2)
- autobump bio/vep/cache (#2690) (0ea80f3)
- autobump bio/vep/plugins (#2691) (1b0108f)
- autobump bio/whatshap/haplotag (#2637) (5705ffc)
- Update datavzrd to v2.36.1 (#2692) (cba4946)