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Update spinal levels files generated by the University of Calgary's Phillips Lab based on the Mendez et al. paper #3

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Update spinal levels files generated by the University of Calgary's Phillips Lab based on the Mendez et al. paper #3

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Commits on Feb 13, 2023

  1. add extra spinal levels info L1 - L5

    @sandrinebedard
    sandrinebedard committed Feb 13, 2023
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  2. add updated spinal levels

    @sandrinebedard
    sandrinebedard committed Feb 13, 2023
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Commits on Feb 14, 2023

  1. update spinal levels withour reorientation to RPI

    @sandrinebedard
    sandrinebedard committed Feb 14, 2023
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  2. Add unprocessed Phillips Lab PAM50 levels (#5)

    @joshuacwnewton
    joshuacwnewton authored Feb 14, 2023
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  3. Merge branch 'master' into sb/update-spinal-levels

    @joshuacwnewton
    joshuacwnewton committed Feb 14, 2023
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  4. Remove unprocessed spinal levels

    @joshuacwnewton
    joshuacwnewton committed Feb 14, 2023
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  5. Add README.md with updated processing script

    @joshuacwnewton
    joshuacwnewton committed Feb 14, 2023
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Commits on Apr 3, 2023

  1. add notebook to generate spinal level map

    @sandrinebedard
    sandrinebedard committed Apr 3, 2023
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Commits on Apr 27, 2023

  1. Attempt to estimate spinal level using intervertebral foramen distance

    @tzebre
    tzebre committed Apr 27, 2023
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  2. Attempt to estimate spinal level using intervertebral foramen distanc… 

    …e (Triangle estimation correction)
    @tzebre
    tzebre committed Apr 27, 2023
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  3. data in csv

    @tzebre
    tzebre committed Apr 27, 2023
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Commits on Apr 28, 2023

  1. estimation with dorsal width

    @tzebre
    tzebre committed Apr 28, 2023
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  2. compute the 3D eucledean distance to position rostral and caudal rootlet

    @sandrinebedard
    sandrinebedard committed Apr 28, 2023
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  3. add z_ref since z_c is not adeaqute

    @sandrinebedard
    sandrinebedard committed Apr 28, 2023
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  4. sort by z_c

    @sandrinebedard
    sandrinebedard committed Apr 28, 2023
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  5. Diameter + width for estimation

    @tzebre
    tzebre committed Apr 28, 2023
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  6. Merge remote-tracking branch 'origin/sb/update-spinal-levels' into sb… 

    …/update-spinal-levels

# Conflicts:
#	code/spine_level_theo_sandrine_modif.ipynb
    @tzebre
    tzebre committed Apr 28, 2023
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  7. Revert "Diameter + width for estimation" 

    This reverts commit 6a2e221.
    @tzebre
    tzebre committed Apr 28, 2023
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  8. dorsal width and posterior cord

    @tzebre
    tzebre committed Apr 28, 2023
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  9. dorsal width and posterior SC

    @tzebre
    tzebre committed Apr 28, 2023
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Commits on May 1, 2023

  1. add foramen file and notebbok with STD

    @tzebre
    tzebre committed May 1, 2023
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Commits on May 4, 2023

  1. clean notebook with and without std 'spinal_level_theo_sandrine_STD'

    @tzebre
    tzebre committed May 4, 2023
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  2. remove old notebook

    @tzebre
    tzebre committed May 4, 2023
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  3. add notebook to generate mendez_df.csv with Supp_values

    @tzebre
    tzebre committed May 4, 2023
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Commits on May 10, 2023

  1. New version of notebook, modif mm to voxel conversion

    @tzebre
    tzebre committed May 10, 2023
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  2. local commit of graph testing

    @tzebre
    tzebre committed May 10, 2023
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Commits on May 16, 2023

  1. push commit with graph and ration modification

    @tzebre
    tzebre committed May 16, 2023
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