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Issues list

Time inconsistent reconciliation
#256 opened Jul 20, 2023 by tomas-najer
Can I input iqtree .treefile format
#255 opened Feb 18, 2023 by xsq2022
Everything Black
#253 opened Oct 12, 2022 by Alex-Grossi
Unable to to open empress GUI
#252 opened Oct 10, 2022 by bimbim1803
CLI: Clustering should output .csv
#215 opened Aug 7, 2020 by aremath
CLI: Remove spurious output
#211 opened Aug 7, 2020 by aremath
Empress GUI Cluster PDV output is confusing enhancement New feature or request
#192 opened Jul 30, 2020 by aremath
Reading reconciliation/recongraph from .csv enhancement New feature or request
#174 opened Jul 22, 2020 by aremath
Update deprecated readmes refactor Code style optimization
#97 opened Jun 24, 2020 by ssantichaivekin
Hide internal functions by using leading underscore refactor Code style optimization
#94 opened Jun 23, 2020 by ssantichaivekin
Clean up unittests recon_vis/test_Tree.py refactor Code style optimization
#79 opened Jun 17, 2020 by ssantichaivekin
4 tasks
Diameter.py is mostly unused refactor Code style optimization
#62 opened Jun 7, 2020 by rlhadas
Replace dict with Reconciliation and ReconGraph data structures refactor Code style optimization
#30 opened May 29, 2020 by ssantichaivekin
2 tasks
DTLMedian.py documentation issues documentation Improvements or additions to documentation
#26 opened May 25, 2020 by rlhadas
Revisit how we deal with floating point costs bug Something isn't working
#18 opened May 20, 2020 by ssantichaivekin
ProTip! no:milestone will show everything without a milestone.