Skip to content

Issues: stemangiola/tidybulk

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

13 Open 70 Closed
13 Open 70 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

The sample data of the test_gene_enrichment() function reports an error and cannot be used.
#316 opened Jul 25, 2024 by zhangkaicr
2
Add the method to simplify complete confounders is they are not factor of interest enhancement New feature or request
#301 opened Nov 15, 2023 by stemangiola
@stemangiola
Prepare for upcoming Seurat v5 release
#298 opened Oct 3, 2023 by Gesmira
the attribute "internals" $ tt_columns abundance_scaled, carries the environment with it inflating the RDS file size
#295 opened Sep 11, 2023 by stemangiola
Improve the documentation for tidybulk documentation Improvements or additions to documentation good first issue Good for newcomers
#282 opened Jul 22, 2023 by stemangiola
@GrootJ @aliosmancetin
29
Warning in CHECK, mistery
#273 opened Jun 29, 2023 by stemangiola
pathway analysis using tidybulk
#263 opened Jan 13, 2023 by adityamahadevaniyer
8
for SE save internals within the metadata rather than attributes. enhancement New feature or request
#240 opened Jun 25, 2022 by stemangiola
Allow logFC shrinkage in DESeq enhancement New feature or request
#224 opened Nov 1, 2021 by antass
4
tidybulk Replace pivot_* with select_columns_* enhancement New feature or request
#181 opened May 6, 2021 by stemangiola
3
Feedback from talk: get_bibliography enhancement New feature or request
#180 opened May 5, 2021 by stemangiola
1
for scaling check the presence of a multiplier column
#122 opened Oct 12, 2020 by stemangiola
1
test_gene_overrepresentation: visualising results enhancement New feature or request
#47 opened May 31, 2020 by mblue9
7
ProTip! Find all open issues with in progress development work with linked:pr.