Deploying to gh-pages from @ 74a730c 🚀

_modules/trx/io.html

@@ -355,9 +355,9 @@ <h1>Source code for trx.io</h1><div class="highlight"><pre>
 <span class="kn">from</span> <span class="nn">trx.utils</span> <span class="kn">import</span> <span class="n">split_name_with_gz</span>
 
 
-<div class="viewcode-block" id="get_trx_tmpdir">
-<a class="viewcode-back" href="../../autoapi/trx/io/index.html#trx.io.get_trx_tmpdir">[docs]</a>
-<span class="k">def</span> <span class="nf">get_trx_tmpdir</span><span class="p">():</span>
+<div class="viewcode-block" id="get_trx_tmp_dir">
+<a class="viewcode-back" href="../../autoapi/trx/io/index.html#trx.io.get_trx_tmp_dir">[docs]</a>
+<span class="k">def</span> <span class="nf">get_trx_tmp_dir</span><span class="p">():</span>
     <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">getenv</span><span class="p">(</span><span class="s1">&#39;TRX_TMPDIR&#39;</span><span class="p">)</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
         <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">getenv</span><span class="p">(</span><span class="s1">&#39;TRX_TMPDIR&#39;</span><span class="p">)</span> <span class="o">==</span> <span class="s1">&#39;use_working_dir&#39;</span><span class="p">:</span>
             <span class="n">trx_tmp_dir</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">getcwd</span><span class="p">()</span>

_modules/trx/streamlines_ops.html

@@ -383,7 +383,7 @@ <h1>Source code for trx.streamlines_ops</h1><div class="highlight"><pre>
 <a class="viewcode-back" href="../../autoapi/trx/streamlines_ops/index.html#trx.streamlines_ops.get_streamline_key">[docs]</a>
 <span class="k">def</span> <span class="nf">get_streamline_key</span><span class="p">(</span><span class="n">streamline</span><span class="p">,</span> <span class="n">precision</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
 <span class="w">    </span><span class="sd">&quot;&quot;&quot;Produces a key using a hash from a streamline using a few points only and</span>
-<span class="sd">    the desired precision </span>
+<span class="sd">    the desired precision</span>
 
 <span class="sd">    Parameters</span>
 <span class="sd">    ----------</span>

_modules/trx/utils.html

@@ -378,7 +378,7 @@ <h1>Source code for trx.utils</h1><div class="highlight"><pre>
     <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">obj</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">memmap</span><span class="p">):</span>
         <span class="k">del</span> <span class="n">obj</span>
     <span class="k">else</span><span class="p">:</span>
-        <span class="n">logging</span><span class="o">.</span><span class="n">warning</span><span class="p">(</span><span class="s1">&#39;Object to be close or deleted must be np.memmap&#39;</span><span class="p">)</span></div>
+        <span class="n">logging</span><span class="o">.</span><span class="n">debug</span><span class="p">(</span><span class="s1">&#39;Object to be close or deleted must be np.memmap&#39;</span><span class="p">)</span></div>
 
 
 
@@ -795,7 +795,7 @@ <h1>Source code for trx.utils</h1><div class="highlight"><pre>
 <span class="sd">    trx : Tractogram</span>
 <span class="sd">        Tractogram to verify.</span>
 <span class="sd">    dict_dtype : dict</span>
-<span class="sd">        Dictionary containing the dtype to verify.</span>
+<span class="sd">        Dictionary containing all elements dtype to verify.</span>
 <span class="sd">    Returns</span>
 <span class="sd">    -------</span>
 <span class="sd">    output : bool</span>

_sources/autoapi/trx/io/index.rst.txt

@@ -13,7 +13,7 @@ Functions
 
 .. autoapisummary::
 
-   trx.io.get_trx_tmpdir
+   trx.io.get_trx_tmp_dir
    trx.io.load_sft_with_reference
    trx.io.load
    trx.io.save
@@ -33,7 +33,7 @@ Attributes
 
 
 
-.. py:function:: get_trx_tmpdir()
+.. py:function:: get_trx_tmp_dir()
 
 
 .. py:function:: load_sft_with_reference(filepath, reference=None, bbox_check=True)

_sources/autoapi/trx/streamlines_ops/index.rst.txt

@@ -113,7 +113,7 @@ Attributes
 
    
    Produces a key using a hash from a streamline using a few points only and
-   the desired precision 
+   the desired precision
 
 
    :Parameters:

_sources/autoapi/trx/utils/index.rst.txt

@@ -455,7 +455,7 @@ Attributes
            Tractogram to verify.
 
        **dict_dtype** : dict
-           Dictionary containing the dtype to verify.
+           Dictionary containing all elements dtype to verify.
 
        **Returns**
            ..

autoapi/trx/io/index.html

@@ -372,7 +372,7 @@ <h2>Module Contents<a class="headerlink" href="#module-contents" title="Link to
 <h3>Functions<a class="headerlink" href="#functions" title="Link to this heading">#</a></h3>
 <table class="autosummary longtable table autosummary">
 <tbody>
-<tr class="row-odd"><td><p><a class="reference internal" href="#trx.io.get_trx_tmpdir" title="trx.io.get_trx_tmpdir"><code class="xref py py-obj docutils literal notranslate"><span class="pre">get_trx_tmpdir</span></code></a>()</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="#trx.io.get_trx_tmp_dir" title="trx.io.get_trx_tmp_dir"><code class="xref py py-obj docutils literal notranslate"><span class="pre">get_trx_tmp_dir</span></code></a>()</p></td>
 <td><p></p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="#trx.io.load_sft_with_reference" title="trx.io.load_sft_with_reference"><code class="xref py py-obj docutils literal notranslate"><span class="pre">load_sft_with_reference</span></code></a>(filepath[, reference, bbox_check])</p></td>
@@ -402,8 +402,8 @@ <h3>Attributes<a class="headerlink" href="#attributes" title="Link to this headi
 <dd></dd></dl>
 
 <dl class="py function">
-<dt class="sig sig-object py" id="trx.io.get_trx_tmpdir">
-<span class="sig-prename descclassname"><span class="pre">trx.io.</span></span><span class="sig-name descname"><span class="pre">get_trx_tmpdir</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="../../../_modules/trx/io.html#get_trx_tmpdir"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#trx.io.get_trx_tmpdir" title="Link to this definition">#</a></dt>
+<dt class="sig sig-object py" id="trx.io.get_trx_tmp_dir">
+<span class="sig-prename descclassname"><span class="pre">trx.io.</span></span><span class="sig-name descname"><span class="pre">get_trx_tmp_dir</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="../../../_modules/trx/io.html#get_trx_tmp_dir"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#trx.io.get_trx_tmp_dir" title="Link to this definition">#</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
@@ -472,7 +472,7 @@ <h3>Attributes<a class="headerlink" href="#attributes" title="Link to this headi
 <li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#functions">Functions</a></li>
 <li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#attributes">Attributes</a><ul class="nav section-nav flex-column">
 <li class="toc-h4 nav-item toc-entry"><a class="reference internal nav-link" href="#trx.io.dipy_available"><code class="docutils literal notranslate"><span class="pre">dipy_available</span></code></a></li>
-<li class="toc-h4 nav-item toc-entry"><a class="reference internal nav-link" href="#trx.io.get_trx_tmpdir"><code class="docutils literal notranslate"><span class="pre">get_trx_tmpdir()</span></code></a></li>
+<li class="toc-h4 nav-item toc-entry"><a class="reference internal nav-link" href="#trx.io.get_trx_tmp_dir"><code class="docutils literal notranslate"><span class="pre">get_trx_tmp_dir()</span></code></a></li>
 <li class="toc-h4 nav-item toc-entry"><a class="reference internal nav-link" href="#trx.io.load_sft_with_reference"><code class="docutils literal notranslate"><span class="pre">load_sft_with_reference()</span></code></a></li>
 <li class="toc-h4 nav-item toc-entry"><a class="reference internal nav-link" href="#trx.io.load"><code class="docutils literal notranslate"><span class="pre">load()</span></code></a></li>
 <li class="toc-h4 nav-item toc-entry"><a class="reference internal nav-link" href="#trx.io.save"><code class="docutils literal notranslate"><span class="pre">save()</span></code></a></li>

autoapi/trx/utils/index.html

@@ -654,7 +654,7 @@ <h3>Attributes<a class="headerlink" href="#attributes" title="Link to this headi
 <dd class="field-odd"><dl class="simple">
 <dt><strong>trx</strong><span class="classifier">Tractogram</span></dt><dd><p>Tractogram to verify.</p>
 </dd>
-<dt><strong>dict_dtype</strong><span class="classifier">dict</span></dt><dd><p>Dictionary containing the dtype to verify.</p>
+<dt><strong>dict_dtype</strong><span class="classifier">dict</span></dt><dd><p>Dictionary containing all elements dtype to verify.</p>
 </dd>
 <dt><strong>Returns</strong></dt><dd></dd>
 <dt><strong>——-</strong></dt><dd></dd>

genindex.html

@@ -478,7 +478,7 @@ <h2 id="G">G</h2>
 </li>
       <li><a href="autoapi/trx/fetcher/index.html#trx.fetcher.get_testing_files_dict">get_testing_files_dict() (in module trx.fetcher)</a>
 </li>
-      <li><a href="autoapi/trx/io/index.html#trx.io.get_trx_tmpdir">get_trx_tmpdir() (in module trx.io)</a>
+      <li><a href="autoapi/trx/io/index.html#trx.io.get_trx_tmp_dir">get_trx_tmp_dir() (in module trx.io)</a>
 </li>
       <li><a href="autoapi/trx/trx_file_memmap/index.html#trx.trx_file_memmap.TrxFile.groups">groups (trx.trx_file_memmap.TrxFile attribute)</a>
 </li>