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Fix https://github.com/ropensci/tarchetypes/discussions/138 #1

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Fix https://github.com/ropensci/tarchetypes/discussions/138 #1

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2 changes: 1 addition & 1 deletion reprex_here/reprex_subproject/_targets.R
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
library(targets)
library(tarchetypes)
library(here)
list(tar_render(report, here("reprex_subproject/output/report.Rmd")))
list(tar_render(report, "output/report.Rmd"))
2 changes: 1 addition & 1 deletion reprex_here/reprex_subproject/_targets/meta/meta
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@@ -1,2 +1,2 @@
name|type|data|command|depend|seed|path|time|size|bytes|format|repository|iteration|parent|children|seconds|warnings|error
report|stem||fad9418cfd722539|4745aa592080ea1d|-237041703||t19409.4211828647s||0|file|local|vector|||1.361||pandoc document conversion failed with error 99
report|stem|2f5c4b3005668782|44e3ffe3658e1fb4|4745aa592080ea1d|-237041703|output/report.html*output/report.Rmd*output/report_files|t19410.108878107s|c4eeb01cee59a9d5|802969|file|local|vector|||4.38||
4 changes: 2 additions & 2 deletions reprex_here/reprex_subproject/_targets/meta/process
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
name|value
pid|51593
version_r|4.0.2
pid|29972
version_r|4.2.1
version_targets|0.14.2
2 changes: 1 addition & 1 deletion reprex_here/reprex_subproject/_targets/meta/progress
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@@ -1,3 +1,3 @@
name|type|parent|branches|progress
report|stem|report|0|started
report|stem|report|0|errored
report|stem|report|0|built
8 changes: 7 additions & 1 deletion reprex_here/reprex_subproject/output/report.Rmd
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Expand Up @@ -14,6 +14,12 @@ library(dplyr)
library(ggplot2)
```

```{r}
root <- rprojroot::find_root_file(criterion = "_targets.R") # Find the pipeline root directory.
knitr::opts_knit$set(root.dir = root) # Run the report from the pipeline root directory.
knitr::opts_chunk$set(fig.path = file.path(root, "output", "report_files/"))
```

```{r}
df <- datasets::iris %>%
dplyr::as_tibble()
Expand All @@ -23,7 +29,7 @@ df <- datasets::iris %>%
```{r, include = FALSE}
src <- lapply(c("setosa", "versicolor", "virginica"),
function(species) {
knitr::knit_expand(file = here("reprex_subproject/output/template.Rmd"))
knitr::knit_expand(file = file.path(root, "output/template.Rmd"))
}
)
```
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219 changes: 208 additions & 11 deletions reprex_here/reprex_subproject/output/report.html
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13 changes: 10 additions & 3 deletions reprex_here/reprex_subproject/output/report.md
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Expand Up @@ -10,6 +10,13 @@ output:



```r
root <- rprojroot::find_root_file(criterion = "_targets.R") # Find the pipeline root directory.
knitr::opts_knit$set(root.dir = root) # Run the report from the pipeline root directory.
knitr::opts_chunk$set(fig.path = file.path(root, "output", "report_files/"))
```


```r
df <- datasets::iris %>%
dplyr::as_tibble()
Expand All @@ -23,16 +30,16 @@ df <- datasets::iris %>%
## setosa


![](report_files/figure-html/species_loop-setosa-1.png)<!-- -->
![](/Users/c240390/Desktop/reprex_tarchetype_rmrarkdown/reprex_here/reprex_subproject/output/report_files/species_loop-setosa-1.png)<!-- -->


## versicolor


![](report_files/figure-html/species_loop-versicolor-1.png)<!-- -->
![](/Users/c240390/Desktop/reprex_tarchetype_rmrarkdown/reprex_here/reprex_subproject/output/report_files/species_loop-versicolor-1.png)<!-- -->


## virginica


![](report_files/figure-html/species_loop-virginica-1.png)<!-- -->
![](/Users/c240390/Desktop/reprex_tarchetype_rmrarkdown/reprex_here/reprex_subproject/output/report_files/species_loop-virginica-1.png)<!-- -->