Rust implementation of the amino acid alignment to a nucleotide alignment described here: https://academic.oup.com/bioinformatics/article/31/11/1836/2365396.
Primarily for use with hmmer.
aa2nucaln ./path/to/fasta > output.fna
Output is to STDOUT.
Output of aa2nucaln help page:
Max Brown <[email protected]>
Convert an amino acid alignment to a nucelotide alignment.
For more info, see: https://academic.oup.com/bioinformatics/article/31/11/1836/2365396
USAGE:
aa2nucaln [OPTIONS] [fasta]
ARGS:
<fasta> The reference amino acid alignment file in fasta format.
OPTIONS:
-h, --help Print help information
-i, --ignore <ignore> Should the lower-case letters in an amino acid alignment be ignored?
[default: true]
-V, --version Print version information