Try wrangling MEDIC files. #38
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python package | |
| on: | |
| push: | |
| branches: [ '*' ] | |
| tags: [ '*' ] | |
| pull_request: | |
| branches: [ master, 'maint/*' ] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| contents: read | |
| jobs: | |
| job_metadata: | |
| if: github.repository == 'nipreps/sdcflows' | |
| runs-on: ubuntu-latest | |
| outputs: | |
| commit_message: ${{ steps.get_commit_message.outputs.commit_message }} | |
| version: ${{ steps.show_version.outputs.version }} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Print head git commit message | |
| id: get_commit_message | |
| run: | | |
| if [[ -z "$COMMIT_MSG" ]]; then | |
| COMMIT_MSG=$(git show -s --format=%s $REF) | |
| fi | |
| echo commit_message=$COMMIT_MSG | tee -a $GITHUB_OUTPUT | |
| env: | |
| COMMIT_MSG: ${{ github.event.head_commit.message }} | |
| REF: ${{ github.event.pull_request.head.sha }} | |
| - name: Detect version | |
| id: show_version | |
| run: | | |
| if [[ "$GITHUB_REF" == refs/tags/* ]]; then | |
| VERSION=${GITHUB_REF##*/} | |
| else | |
| pip install -U build hatch hatchling pip twine docutils | |
| VERSION=$( python -m hatch version | tail -n1 | xargs ) | |
| fi | |
| echo version=$VERSION | tee -a $GITHUB_OUTPUT | |
| build: | |
| if: github.repository == 'nipreps/sdcflows' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python 3 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3 | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Build sdcflows | |
| run: pipx run build | |
| - name: Check distributions | |
| run: pipx run twine check dist/* | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| test: | |
| if: "!startsWith(github.ref, 'refs/tags/') && !contains(github.event.head_commit.message, '[skip ci]')" | |
| needs: [build, job_metadata] | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9", "3.12"] | |
| install: [repo, sdist, wheel, editable] | |
| env: | |
| INSTALL_TYPE: ${{ matrix.install }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| if: matrix.install == 'repo' || matrix.install == 'editable' | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Fetch packages | |
| if: matrix.install == 'sdist' || matrix.install == 'wheel' | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - name: Select archive | |
| run: | | |
| if [ "$INSTALL_TYPE" = "sdist" ]; then | |
| ARCHIVE=$( ls dist/*.tar.gz ) | |
| elif [ "$INSTALL_TYPE" = "wheel" ]; then | |
| ARCHIVE=$( ls dist/*.whl ) | |
| elif [ "$INSTALL_TYPE" = "repo" ]; then | |
| ARCHIVE="." | |
| elif [ "$INSTALL_TYPE" = "editable" ]; then | |
| ARCHIVE="-e ." | |
| fi | |
| echo "ARCHIVE=$ARCHIVE" | tee -a $GITHUB_ENV | |
| - name: Install package | |
| run: python -m pip install $ARCHIVE | |
| - name: Check version | |
| run: | | |
| INSTALLED_VERSION=$(python -c 'import sdcflows; print(sdcflows.__version__, end="")') | |
| echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
| test "${INSTALLED_VERSION}" = "${VERSION}" | |
| env: | |
| VERSION: ${{ needs.job_metadata.outputs.version }} | |
| flake8: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| - run: pipx run flake8-pyproject sdcflows/ | |
| # codespell: | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - uses: actions/checkout@v4 | |
| # - uses: codespell-project/actions-codespell@v2 |