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[develop] Modify workflow to use AQMv8 (CMAQ 5.4) #1134

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[develop] Modify workflow to use AQMv8 (CMAQ 5.4) #1134

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4d35dcc
Initial AQM v8 changes
BrianCurtis-NOAA Sep 25, 2024
8968933
Adjustment to address issue os grib2 upp build error
BrianCurtis-NOAA Sep 25, 2024
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6 changes: 4 additions & 2 deletions Externals.cfg
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Original file line number Diff line number Diff line change
Expand Up @@ -9,10 +9,12 @@ required = True

[ufs-weather-model]
protocol = git
repo_url = https://github.com/ufs-community/ufs-weather-model
#repo_url = https://github.com/ufs-community/ufs-weather-model
repo_url = https://github.com/BrianCurtis-NOAA/ufs-weather-model
# Specify either a branch name or a hash but not both.
#branch = develop
hash = a1143cc
branch = aqmv8
#hash = a1143cc
local_path = sorc/ufs-weather-model
required = True

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3 changes: 2 additions & 1 deletion modulefiles/build_hera_intel.lua
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Expand Up @@ -8,7 +8,8 @@ whatis([===[Loads libraries needed for building the UFS SRW App on Hera ]===])
prepend_path("MODULEPATH","/contrib/sutils/modulefiles")
load("sutils")

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.6.0/envs/unified-env-rocky8/install/modulefiles/Core")
--prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.6.0/envs/unified-env-rocky8/install/modulefiles/Core")
prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.6.0/envs/fms-2024.01/install/modulefiles/Core")

stack_intel_ver=os.getenv("stack_intel_ver") or "2021.5.0"
load(pathJoin("stack-intel", stack_intel_ver))
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6 changes: 3 additions & 3 deletions modulefiles/srw_common.lua
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Expand Up @@ -6,12 +6,12 @@ load("netcdf-c/4.9.2")
load("netcdf-fortran/4.6.1")
load("parallelio/2.5.10")
load("esmf/8.6.0")
load("fms/2023.04")
load("fms/2024.01")

load("bacio/2.4.1")
load("crtm/2.4.0.1")
load("g2/3.4.5")
load("g2tmpl/1.10.2")
load("g2/3.5.1")
load("g2tmpl/1.13.0")
load("ip/4.3.0")
load("sp/2.5.0")
load("w3emc/2.10.0")
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19 changes: 13 additions & 6 deletions parm/aqm.rc
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Expand Up @@ -7,15 +7,19 @@
#
# General settings
#
ae_matrix_nml: {{ fixaqm }}/epa/AE_cb6r3_ae6_aq.nml
gc_matrix_nml: {{ fixaqm }}/epa/GC_cb6r3_ae6_aq.nml
nr_matrix_nml: {{ fixaqm }}/epa/NR_cb6r3_ae6_aq.nml
ae_matrix_nml: {{ fixaqm }}/epa/AE_cb6r5_ae7_aq.nml
gc_matrix_nml: {{ fixaqm }}/epa/GC_cb6r5_ae7_aq.nml
nr_matrix_nml: {{ fixaqm }}/epa/NR_cb6r5_ae7_aq.nml
tr_matrix_nml: {{ fixaqm }}/epa/Species_Table_TR_0.nml

csqy_data: {{ fixaqm }}/epa/CSQY_DATA_cb6r3_ae6_aq
csqy_data: {{ fixaqm }}/epa/CSQY_DATA_cb6r5_ae7_aq
optics_data: {{ fixaqm }}/epa/PHOT_OPTICS.dat
omi_data: {{ fixaqm }}/epa/omi_cmaq_2015_361X179.dat

desid_chem_ctrl: {{ fixaqm }}/epa/CMAQ_Control_DESID_cb6r5_ae7_aq.nml
desid_ctrl: {{ fixaqm }}/epa/CMAQ_Control_DESID.nml
misc_ctrl: {{ fixaqm }}/epa/CMAQ_Control_Misc.nml

init_concentrations: {{ init_concentrations | lower }}

run_aerosol: true
Expand All @@ -28,8 +32,10 @@ mp_tracer_map: thompson
dy_tracer_map_start: 11
{%- endif %}

ctm_aod: true
ctm_pmdiag: true
ctm_aod: false
ctm_pmdiag: false
ctm_photdiag: false
ctm_depvfile: false
ctm_stdout: maintask

#
Expand Down Expand Up @@ -87,6 +93,7 @@ anthro_species::
ALD2 1.00000 ALD2 KG/M2/S
ALD2_PRIMARY 1.00000 ALD2_PRIMARY KG/M2/S
ALDX 1.00000 ALDX KG/M2/S
APIN 1.00000 APIN KG/M2/S
BENZ 1.00000 BENZ KG/M2/S
BUTADIENE13 1.00000 BUTADIENE13 KG/M2/S
CH4 1.00000 CH4 KG/M2/S
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77 changes: 38 additions & 39 deletions parm/diag_table_aqm.FV3_GFS_v16
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Expand Up @@ -120,13 +120,6 @@
#"gfs_dyn", "ice_nc", "nicp", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "rain_nc", "ntrnc", "fv3_history", "all", .false., "none", 2

"gfs_phys", "frzr", "frzr", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "frzrb", "frzrb", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "frozr", "frozr", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "frozrb", "frozrb", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "tsnowp", "tsnowp", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "tsnowpb", "tsnowpb", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "rhonewsn", "rhonewsn", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "ALBDO_ave", "albdo_ave", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "cnvprcp_ave", "cprat_ave", "fv3_history2d", "all", .false., "none", 2
"gfs_phys", "cnvprcpb_ave", "cpratb_ave", "fv3_history2d", "all", .false., "none", 2
Expand Down Expand Up @@ -370,28 +363,40 @@
#"gfs_dyn", "tolu", "tolu", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "hg", "hg", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "hgiigas", "hgiigas", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apin", "apin", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "terpnro2", "terpnro2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "mtno3", "mtno3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "clo", "clo", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "clno3", "clno3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb1", "svavb1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb2", "svavb2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb3", "svavb3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb4", "svavb4", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "DMS", "DMS", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "MSA", "MSA", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aso4j", "aso4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aso4i", "aso4i", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "anh4j", "anh4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "anh4i", "anh4i", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "ano3j", "ano3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "ano3i", "ano3i", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aalk1j", "aalk1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aalk2j", "aalk2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "axyl1j", "axyl1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "axyl2j", "axyl2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "axyl3j", "axyl3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atol1j", "atol1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atol2j", "atol2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atol3j", "atol3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "abnz1j", "abnz1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "abnz2j", "abnz2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "abnz3j", "abnz3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apah1j", "apah1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apah2j", "apah2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apah3j", "apah3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atrp1j", "atrp1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atrp2j", "atrp2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aorgh2oj", "aorgh2oj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amtno3j", "amtno3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amthydj", "amthydj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apoci", "apoci", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apocj", "apocj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apncomi", "apncomi", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apncomj", "apncomj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb1j", "aavb1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb2j", "aavb2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb3j", "aavb3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb4j", "aavb4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt1j", "amt1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt2j", "amt2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt3j", "amt3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt4j", "amt4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt5j", "amt5j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt6j", "amt6j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aiso1j", "aiso1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aiso2j", "aiso2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "asqtj", "asqtj", "fv3_history", "all", .false., "none", 2
Expand Down Expand Up @@ -454,22 +459,16 @@
#"gfs_dyn", "asvoo2j", "asvoo2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "asvoo3j", "asvoo3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "nh3", "nh3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_alk1", "sv_alk1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_alk2", "sv_alk2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_xyl1", "sv_xyl1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_xyl2", "sv_xyl2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_tol1", "sv_tol1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_tol2", "sv_tol2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_bnz1", "sv_bnz1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_bnz2", "sv_bnz2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_pah1", "sv_pah1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_pah2", "sv_pah2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_trp1", "sv_trp1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_trp2", "sv_trp2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_iso1", "sv_iso1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_iso2", "sv_iso2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_sqt", "sv_sqt", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "lv_pcsog", "lv_pcsog", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sviso1", "sviso1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sviso2", "sviso2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svsqt", "svsqt", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "lvpcsog", "lvpcsog", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt1", "svmt1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt2", "svmt2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt3", "svmt3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt4", "svmt4", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt5", "svmt5", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt6", "svmt6", "fv3_history", "all", .false., "none", 2
"gfs_dyn", "o3_ave", "o3_ave", "fv3_history", "all", .false., "none", 2
"gfs_dyn", "no_ave", "no_ave", "fv3_history", "all", .false., "none", 2
"gfs_dyn", "no2_ave", "no2_ave", "fv3_history", "all", .false., "none", 2
Expand Down
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