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Add writers for xdr and ascii files #40

Merged
merged 124 commits into from
Jun 20, 2024
Merged

Add writers for xdr and ascii files #40

merged 124 commits into from
Jun 20, 2024

Commits on Jan 26, 2024

  1. Add xdr and ascii writers

    @trossi
    trossi committed Jan 26, 2024
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  2. Assert that there is no unexpected value

    @trossi
    trossi committed Jan 26, 2024
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  3. Include non-zero gp value in representation

    @trossi
    trossi committed Jan 26, 2024
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  4. Add initial Python to R converter

    @trossi
    trossi committed Jan 26, 2024
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  5. Simplify string ndarray handling

    @trossi
    trossi committed Jan 26, 2024
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  6. Add converter for dict

    @trossi
    trossi committed Jan 26, 2024
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  7. Add converter for matrices

    @trossi
    trossi committed Jan 26, 2024
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  8. Add function for building r lists

    @trossi
    trossi committed Jan 26, 2024
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  9. Convert tuple to list

    @trossi
    trossi committed Jan 26, 2024
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  10. Use consistent function naming

    @trossi
    trossi committed Jan 26, 2024
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  11. Convert arrays of any dimensionality

    @trossi
    trossi committed Jan 26, 2024
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  12. Add converter for basic types

    @trossi
    trossi committed Jan 26, 2024
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  13. Add compression

    @trossi
    trossi committed Jan 26, 2024
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  14. Use functions instead of a class

    @trossi
    trossi committed Jan 26, 2024
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  15. Add docstrings

    @trossi
    trossi committed Jan 26, 2024
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  16. Add Python-to-R converter functions

    @trossi
    trossi committed Jan 26, 2024
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  17. Add docstring

    @trossi
    trossi committed Jan 26, 2024
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  18. Rename write_all() to write_r_data()

    @trossi
    trossi committed Jan 26, 2024
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  19. Fix flake8 errors

    @trossi
    trossi committed Jan 26, 2024
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  20. Update docstrings

    @trossi
    trossi committed Jan 26, 2024
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  21. Fix ruff

    @trossi
    trossi committed Jan 26, 2024
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Commits on Feb 27, 2024

  1. Add support for RDA files (in addition to RDS)

    @trossi
    trossi committed Feb 27, 2024
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Commits on Feb 29, 2024

  1. Add initial test for writing

    @trossi
    trossi committed Feb 29, 2024
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  2. Write RDA magic with other magic

    @trossi
    trossi committed Feb 29, 2024
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  3. Avoid temporary files in test

    @trossi
    trossi committed Feb 29, 2024
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  4. Include test for ascii files

    @trossi
    trossi committed Feb 29, 2024
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  5. Do not include trailing .0 for doubles

    @trossi
    trossi committed Feb 29, 2024
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  6. Loop over all test files

    @trossi
    trossi committed Feb 29, 2024
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  7. Mark not-implemented features xfail

    @trossi
    trossi committed Feb 29, 2024
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  8. Fix testing Windows-generated ascii files

    @trossi
    trossi committed Feb 29, 2024
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  9. Fix altreps

    @trossi
    trossi committed Feb 29, 2024
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  10. Fix writing NA string

    @trossi
    trossi committed Feb 29, 2024
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  11. Include filenames in pytest output

    @trossi
    trossi committed Feb 29, 2024
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  12. Add debugging output

    @trossi
    trossi committed Feb 29, 2024
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  13. Remove redundant writer functions

    @trossi
    trossi committed Feb 29, 2024
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  14. Enable expression type

    @trossi
    trossi committed Feb 29, 2024
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  15. Enable builtin type

    @trossi
    trossi committed Feb 29, 2024
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  16. Fix empty (None) string

    @trossi
    trossi committed Feb 29, 2024
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  17. Add test for conversion

    @trossi
    trossi committed Feb 29, 2024
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  18. Add option to change version information

    @trossi
    trossi committed Feb 29, 2024
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  19. Fix rda files

    @trossi
    trossi committed Feb 29, 2024
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  20. Set gp flag as plain int

    @trossi
    trossi committed Feb 29, 2024
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  21. Use tuple

    @trossi
    trossi committed Feb 29, 2024
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  22. Fix extra info in version 2 format

    @trossi
    trossi committed Feb 29, 2024
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  23. Skip altreps

    @trossi
    trossi committed Feb 29, 2024
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  24. Generalize list builder

    @trossi
    trossi committed Feb 29, 2024
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  25. Use same encoding as in input

    @trossi
    trossi committed Feb 29, 2024
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  26. Skip ambiguous tests

    @trossi
    trossi committed Feb 29, 2024
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Commits on Mar 1, 2024

  1. Add support for R expression and language

    @trossi
    trossi committed Mar 1, 2024
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  2. Add equality operator for comparing numpy arrays

    @trossi
    trossi committed Mar 1, 2024
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  3. Skip more ambiguous test files

    @trossi
    trossi committed Mar 1, 2024
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  4. Print also python data for debugging

    @trossi
    trossi committed Mar 1, 2024
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  5. Remove unused variable

    @trossi
    trossi committed Mar 1, 2024
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Commits on Mar 4, 2024

  1. Compare string presentations too

    @trossi
    trossi committed Mar 4, 2024
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  2. Allow debug printing in tests

    @trossi
    trossi committed Mar 4, 2024
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  3. Fix ruff

    @trossi
    trossi committed Mar 4, 2024
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  4. Check that integers are small enough

    @trossi
    trossi committed Mar 4, 2024
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  5. Fix mypy

    @trossi
    trossi committed Mar 4, 2024
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  6. Add missing parameters to docstring

    @trossi
    trossi committed Mar 4, 2024
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  7. Use RDS by default

    @trossi
    trossi committed Mar 4, 2024
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  8. Simplify loops

    @trossi
    trossi committed Mar 4, 2024
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  9. Fix typos

    @trossi
    trossi committed Mar 4, 2024
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Commits on Mar 26, 2024

  1. Remove debug prints from tests

    @trossi
    trossi committed Mar 26, 2024
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Commits on Mar 27, 2024

  1. Add test for writing files with compression

    @trossi
    trossi committed Mar 27, 2024
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  2. Use binary mode for writing ascii files

    @trossi
    trossi committed Mar 27, 2024
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  3. Fix mypy

    @trossi
    trossi committed Mar 27, 2024
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Commits on Apr 15, 2024

  1. Do not open temporary file twice

    @trossi
    trossi committed Apr 15, 2024
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Commits on May 6, 2024

  1. Add high-level writer functions

    @trossi
    trossi committed May 6, 2024
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  2. Rename format to file_format

    @trossi
    trossi committed May 6, 2024
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  3. Use high-level interface

    @trossi
    trossi committed May 6, 2024
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  4. Add test for bad RDA creation

    @trossi
    trossi committed May 6, 2024
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  5. Add tests for bad encodings

    @trossi
    trossi committed May 6, 2024
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  6. Include testing None values

    @trossi
    trossi committed May 6, 2024
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  7. Improve error messages

    @trossi
    trossi committed May 6, 2024
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  8. Raise NotImplementedError on untested code

    @trossi
    trossi committed May 6, 2024
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  9. Remove unused function

    @trossi
    trossi committed May 6, 2024
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  10. Add test for writing too large integers

    @trossi
    trossi committed May 6, 2024
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  11. Raise error instead of warning for unwritten tag

    @trossi
    trossi committed May 6, 2024
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  12. Exclude type checking blocks from coverage report

    @trossi
    trossi committed May 6, 2024
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  13. Update authors

    @trossi
    trossi committed May 6, 2024
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Commits on May 16, 2024

  1. Rename writer files to unparser

    @trossi
    trossi committed May 16, 2024
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  2. Rename writing to unparsing

    @trossi
    trossi committed May 16, 2024
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  3. Add unparse_data() function returning bytes

    @trossi
    trossi committed May 16, 2024
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  4. Fix function names in docstring

    @trossi
    trossi committed May 16, 2024
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Commits on Jun 4, 2024

  1. Use Literal type for file format

    @trossi
    trossi committed Jun 4, 2024
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  2. Use Literal type for compression

    @trossi
    trossi committed Jun 4, 2024
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  3. Use None for no compression

    @trossi
    trossi committed Jun 4, 2024
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  4. Use Literal type for file type

    @trossi
    trossi committed Jun 4, 2024
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  5. Simplify handling RDA magic

    @trossi
    trossi committed Jun 4, 2024
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Commits on Jun 5, 2024

  1. Simplify handling RDA vs RDS difference

    @trossi
    trossi committed Jun 5, 2024
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  2. Simplify type names

    @trossi
    trossi committed Jun 5, 2024
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  3. Add test for unparsing bad rda

    @trossi
    trossi committed Jun 5, 2024
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Commits on Jun 6, 2024

  1. Simplify handling version integers in write

    @trossi
    trossi committed Jun 6, 2024
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  2. Use hex representation for R versions

    @trossi
    trossi committed Jun 6, 2024
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  3. Use callback protocol for type hint

    @trossi
    trossi committed Jun 6, 2024
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  4. Fix docstring style

    @trossi
    trossi committed Jun 6, 2024
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  5. Fix mypy in Python 3.12

    @trossi
    trossi committed Jun 6, 2024
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  6. Fix mypy

    @trossi
    trossi committed Jun 6, 2024
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  7. Fix mypy

    @trossi
    trossi committed Jun 6, 2024
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  8. Remove unnecessary casting

    @trossi
    trossi committed Jun 6, 2024
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  9. Add test file for empty list

    @trossi
    trossi committed Jun 6, 2024
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  10. Add test file for empty named list

    @trossi
    trossi committed Jun 6, 2024
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  11. Fix parsing file format

    @trossi
    trossi committed Jun 6, 2024
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  12. Fix converting empty dict

    @trossi
    trossi committed Jun 6, 2024
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  13. Use file type parser function

    @trossi
    trossi committed Jun 6, 2024
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  14. Clarify variable names

    @trossi
    trossi committed Jun 6, 2024
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  15. Add tests for parsing empty lists

    @trossi
    trossi committed Jun 6, 2024
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  16. Allow only non-empty data

    @trossi
    trossi committed Jun 6, 2024
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  17. Add test for failing to create empty RDA file

    @trossi
    trossi committed Jun 6, 2024
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  18. Fix style

    @trossi
    trossi committed Jun 6, 2024
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  19. Include received type in the error message

    @trossi
    trossi committed Jun 6, 2024
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  20. Clarify the conversion of np.array([None])

    @trossi
    trossi committed Jun 6, 2024
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  21. Simplify no-error context

    @trossi
    trossi committed Jun 6, 2024
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  22. Rewrite file checker with existing functions

    @trossi
    trossi committed Jun 6, 2024
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  23. Fix mypy

    @trossi
    trossi committed Jun 6, 2024
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  24. Clarify compression handling

    @trossi
    trossi committed Jun 6, 2024
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  25. Add test for parsing NaN and Inf

    @trossi
    trossi committed Jun 6, 2024
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  26. Fix comparing NaN values

    @trossi
    trossi committed Jun 6, 2024
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  27. Fix writing NaN and Inf

    @trossi
    trossi committed Jun 6, 2024
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  28. Fix formatting alignment

    @trossi
    trossi committed Jun 6, 2024
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  29. Simplify packing bits

    @trossi
    trossi committed Jun 6, 2024
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Commits on Jun 17, 2024

  1. Fix error message

    @trossi
    trossi committed Jun 17, 2024
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  2. Use Literal type and lower case for encodings

    @trossi
    trossi committed Jun 17, 2024
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  3. Fix integer range check in NumPy 2.0

    @trossi
    trossi committed Jun 17, 2024
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