install docker #323
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| name: Website and Docker | ||
| on: [push, workflow_dispatch] | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| # Use docker.io for Docker Hub if empty | ||
| REGISTRY: ghcr.io | ||
| # github.repository as <account>/<repo> | ||
| IMAGE_NAME: ${{ github.repository }} | ||
| jobs: | ||
| job1: | ||
| runs-on: ubuntu-22.04 | ||
| container: rocker/verse:latest | ||
| steps: | ||
| - name: Checkout repository and submodules | ||
| uses: actions/checkout@v3 | ||
| with: | ||
| submodules: true | ||
| # System dependencies | ||
| - name: Install apt dependencies | ||
| run: | | ||
| apt-get update | ||
| apt-get -y upgrade | ||
| apt-get -y install rsync libv8-dev #for deploy and dagitty | ||
| curl -fsSL https://get.docker.com -o install-docker.sh | ||
| sh install-docker.sh | ||
| # Git submodule init fails with unsafe repository | ||
| - name: Add exception for /home/rstudio | ||
| run: git config --global --add safe.directory /home/rstudio | ||
| # Workaround: https://github.com/docker/build-push-action/issues/461 | ||
| - name: Setup Docker buildx | ||
| uses: docker/setup-buildx-action@v2 | ||
| - name: Query dependencies and update old packages | ||
| run: | | ||
| repos = install.packages('remotes') | ||
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | ||
| shell: Rscript {0} | ||
| - name: Cache R packages | ||
| if: runner.os == 'Linux' | ||
| uses: actions/cache@v1 | ||
| with: | ||
| path: /usr/local/lib/R/site-library | ||
| key: ${{ runner.os }}-r-1-${{ hashFiles('.github/depends.Rds') }} | ||
| restore-keys: ${{ runner.os }}-r-1- | ||
| # This lets us augment with additional dependencies | ||
| - name: Install system dependencies | ||
| if: runner.os == 'Linux' | ||
| env: | ||
| RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | ||
| run: | | ||
| Rscript -e "remotes::install_github('r-hub/sysreqs')" | ||
| Rscript -e "install.packages('pkgdown')" | ||
| sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") | ||
| sudo -s eval "$sysreqs" | ||
| - name: Install dependencies | ||
| run: | | ||
| remotes::install_deps(dependencies = TRUE) | ||
| remotes::install_cran("rcmdcheck") | ||
| shell: Rscript {0} | ||
| - name: Check | ||
| env: | ||
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | ||
| run: | | ||
| rcmdcheck::rcmdcheck(args = c("--no-manual"), error_on = "error", check_dir = "check") | ||
| shell: Rscript {0} | ||
| - name: Build pkgdown | ||
| run: | | ||
| PATH=$PATH:$HOME/bin/ Rscript -e 'rmarkdown::render("README.Rmd", output_file = "README.md")' | ||
| PATH=$PATH:$HOME/bin/ Rscript -e 'pkgdown::build_site(".")' | ||
| - name: Update README.md | ||
| uses: @v2.9 | ||
| with: | ||
| github-token: ${{ secrets.GITHUB_TOKEN }} | ||
| push-branch: 'main' | ||
| commit-message: 'Update README.md' | ||
| force-add: 'true' | ||
| files: README.md session* | ||
| name: Levi's GitHub Robot | ||
| email: [email protected] | ||
| - name: Deploy ð | ||
| uses: JamesIves/github-pages-deploy-action@v4 | ||
| with: | ||
| github_token: ${{ secrets.GITHUB_TOKEN }} | ||
| branch: gh-pages # The branch the action should deploy to. | ||
| folder: docs # The folder the action should deploy. | ||
| workspace: $GITHUB_WORKSPACE | ||
| - name: Login to GitHub Container Registry | ||
| uses: docker/login-action@v2 | ||
| with: | ||
| registry: ghcr.io | ||
| username: ${{ github.actor }} | ||
| password: ${{ secrets.GITHUB_TOKEN }} | ||
| # Build and push Docker image with Buildx (don't push on PR) | ||
| # https://github.com/docker/build-push-action | ||
| - name: Build and push Docker image | ||
| id: build-and-push | ||
| uses: docker/build-push-action@v3 | ||
| with: | ||
| context: . | ||
| push: true | ||
| tags: ghcr.io/${{ env.IMAGE_NAME }}:latest | ||
| # Sign the resulting Docker image digest except on PRs. | ||
| # This will only write to the public Rekor transparency log when the Docker | ||
| # repository is public to avoid leaking data. If you would like to publish | ||
| # transparency data even for private images, pass --force to cosign below. | ||
| # https://github.com/sigstore/cosign | ||
| - name: Sign the published Docker image | ||
| if: ${{ github.event_name != 'pull_request' }} | ||
| env: | ||
| COSIGN_EXPERIMENTAL: "true" | ||
| # This step uses the identity token to provision an ephemeral certificate | ||
| # against the sigstore community Fulcio instance. | ||
| run: cosign sign ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}@${{ steps.build-and-push.outputs.digest }} | ||
