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0.3: Model Overview

Zhikai Li edited this page Jul 31, 2024 · 2 revisions

Model type

  1. Official pretrained SaProt (35M)
  2. Official pretrained SaProt (650M)
  3. Trained by yourself on ColabSaprot
  4. Shared by peers on SaprotHub
  5. Saved in your local computer
  6. Multi-model on SaprotHub
Model type Used for Description Input
Official pretrained SaProt (35M) Training Train a protein language model based on SaProt(35M) with your dataset -
Official pretrained SaProt (650M) Training Train a protein language model based on SaProt(650M) with your dataset -
Trained by yourself on ColabSaprot Continually training, Prediction Once you have completed training the model, select this option to use the model you have trained on ColabSaprot for continual training or prediction Select the model from the dropdown menu
Shared by peers on SaprotHub Continually training, Prediction Use models shared on SaprotHub for continual training or prediction Enter the model ID
Saved in your local computer Continually training, Prediction Use models saved on your local computer (.zip file which were saved when finishing training) for continual training or prediction Upload the .zip file
Multi-models on SaprotHub Prediction Ensemble multiple models shared on SaprotHub for prediction.
Each sample will be predicted using multiple models.
Note that: For classification tasks, voting will be used to determine the final predicted category; for regression tasks, the predicted values from each model will be averaged.
Enter the model IDs

How to find a model on SaprotHub

  1. Go to Official SaProtHub Repository to find some model based on your requirements.
  2. Copy the Model ID for future use.