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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 38 25

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 208 62

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 464 199

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 128 85

Repositories

Showing 10 of 100 repositories
  • vcf-js Public

    High performance Variant Call Format (VCF) parser in pure JavaScript

    GMOD/vcf-js’s past year of commit activity
    TypeScript 23 MIT 5 4 4 Updated Nov 10, 2024
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components’s past year of commit activity
    TypeScript 208 Apache-2.0 62 322 (6 issues need help) 22 Updated Nov 10, 2024
  • twobit-js Public

    Read .2bit files with pure JS. Works in node or webpack.

    GMOD/twobit-js’s past year of commit activity
    TypeScript 4 MIT 2 0 1 Updated Nov 10, 2024
  • cram-js Public

    Read CRAM v3 and v2 in node or in the browser

    GMOD/cram-js’s past year of commit activity
    TypeScript 18 MIT 9 5 2 Updated Nov 8, 2024
  • bam-js Public

    Parse BAM and BAM index files in javascript for node and the browser

    GMOD/bam-js’s past year of commit activity
    TypeScript 19 MIT 9 9 1 Updated Nov 7, 2024
  • Apollo3 Public

    JBrowse 2 plugin for editing annotations on an Apollo server

    GMOD/Apollo3’s past year of commit activity
    TypeScript 7 Apache-2.0 4 52 8 Updated Nov 6, 2024
  • jbrowse-plugin-protein3d Public

    3D protein structure visualizer in jbrowse 2 - WIP

    GMOD/jbrowse-plugin-protein3d’s past year of commit activity
    TypeScript 0 0 1 1 Updated Nov 4, 2024
  • react-msaview Public

    A multiple sequence alignment viewer

    GMOD/react-msaview’s past year of commit activity
    TypeScript 18 MIT 1 22 0 Updated Nov 4, 2024
  • jbrowse-react-linear-genome-view-vite-demo Public
    GMOD/jbrowse-react-linear-genome-view-vite-demo’s past year of commit activity
    TypeScript 0 1 0 0 Updated Nov 3, 2024
  • jbrowse-react-linear-genome-view-rsbuild-demo Public
    GMOD/jbrowse-react-linear-genome-view-rsbuild-demo’s past year of commit activity
    TypeScript 0 0 0 0 Updated Nov 3, 2024
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