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Add support for viewing no_ref CRAM files
bug
Something isn't working
#4644
opened Nov 7, 2024 by
cmdcolin
Add ability to get info about the currently mouseover'd position on reads
enhancement
New feature or request
#4643
opened Nov 7, 2024 by
cmdcolin
Using "Custom theme" from umd_plugin in volvox config crashes
bug
Something isn't working
#4641
opened Nov 7, 2024 by
cmdcolin
Add new row to multi-way synteny view
enhancement
New feature or request
#4623
opened Oct 25, 2024 by
cmdcolin
Add --config argument to add-assembly CLI
enhancement
New feature or request
#4622
opened Oct 24, 2024 by
cmdcolin
Reduce UI scroll lag with heavily loaded synteny views
enhancement
New feature or request
high impact
performance
#4616
opened Oct 23, 2024 by
cmdcolin
Content cut off with VariantFeatureWidget - maybe a MUI change to scrolling?
bug
Something isn't working
#4604
opened Oct 16, 2024 by
bbimber
Using jbrowse CLI with no args passed to e.g. add-track produces confusing message with stack trace
bug
Something isn't working
#4575
opened Sep 18, 2024 by
cmdcolin
Make a easier to use GUI and CLI for adding synteny tracks
enhancement
New feature or request
#4574
opened Sep 18, 2024 by
cmdcolin
If displayedRegion is created with negative coordinates, you can run into odd bugs
enhancement
New feature or request
internal
#4562
opened Sep 11, 2024 by
cmdcolin
Closing multiple tracks in a row triggers "double click to zoom in"
bug
Something isn't working
#4559
opened Sep 10, 2024 by
cmdcolin
Create --skipTracks argument for jbrowse text-index
bug
Something isn't working
#4541
opened Aug 29, 2024 by
cmdcolin
Allow making linear-genome-view have a certain "set height" instead of unbounded height
enhancement
New feature or request
#4526
opened Aug 21, 2024 by
cmdcolin
Create concept of "expanding" certain types of discontinuous displayed region boundaries
enhancement
New feature or request
#4524
opened Aug 21, 2024 by
cmdcolin
Specify adapter type through CLI option when adding track
enhancement
New feature or request
#4517
opened Aug 14, 2024 by
kwentine
Create ctrl+k interface for keyboard shortcuts
enhancement
New feature or request
#4514
opened Aug 12, 2024 by
cmdcolin
Strip default items from session snapshots(?)
enhancement
New feature or request
#4503
opened Jul 30, 2024 by
cmdcolin
Inconsistent wrong SNP displayed
bug
Something isn't working
hard-to-reproduce
#4502
opened Jul 30, 2024 by
Maarten-vd-Sande
Set a different background color for the searched genomic coordinates
#4486
opened Jul 18, 2024 by
cmdcolin
Right click synteny trapezoid->Center on feature changes displayedRegions set
enhancement
New feature or request
#4474
opened Jul 1, 2024 by
cmdcolin
features reference other features that do not exist in the file
#4468
opened Jun 21, 2024 by
jasongallant
Rubberband zoom on ellided blocks in overview scale bar gives wrong result
bug
Something isn't working
housekeeping
needs to be tidied up, is a drag on team performance
#4433
opened Jun 12, 2024 by
cmdcolin
Synteny view drawings can vary slightly between browser and scroll state
enhancement
New feature or request
#4432
opened Jun 10, 2024 by
cmdcolin
Dotplot show all regions slightly inaccurate after submitting import form
bug
Something isn't working
#4424
opened Jun 6, 2024 by
cmdcolin
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