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Update train.py, changing RF to XGBoost
Run tests #70: Commit 7d3692f pushed by renayang2023
April 12, 2024 12:12 18m 45s main
April 12, 2024 12:12 18m 45s
create src/predict_drug_target folder for importing from other projects
Run tests #69: Commit ace2287 pushed by vemonet
April 10, 2024 08:40 7m 51s main
April 10, 2024 08:40 7m 51s
cleanup
Run tests #68: Commit 020a4bb pushed by vemonet
February 6, 2024 15:45 6m 10s main
February 6, 2024 15:45 6m 10s
fix train
Run tests #67: Commit ef953a7 pushed by vemonet
February 6, 2024 15:08 8m 3s main
February 6, 2024 15:08 8m 3s
fix train_gpu
Run tests #66: Commit c5832dd pushed by vemonet
February 6, 2024 15:06 7m 0s main
February 6, 2024 15:06 7m 0s
fix memory leak
Run tests #65: Commit 7597589 pushed by vemonet
February 1, 2024 10:30 6m 15s main
February 1, 2024 10:30 6m 15s
fix merging DF
Run tests #64: Commit f679a20 pushed by vemonet
January 30, 2024 15:41 6m 13s main
January 30, 2024 15:41 6m 13s
put back xgboost
Run tests #63: Commit 447058d pushed by vemonet
January 30, 2024 15:29 6m 41s main
January 30, 2024 15:29 6m 41s
rename train_compute to prepare
Run tests #62: Commit 0f181af pushed by vemonet
January 29, 2024 16:02 6m 23s main
January 29, 2024 16:02 6m 23s
fix
Run tests #61: Commit 0445ee5 pushed by vemonet
January 26, 2024 13:26 7m 1s main
January 26, 2024 13:26 7m 1s
replace XGB by random forest
Run tests #60: Commit 7b23440 pushed by vemonet
January 26, 2024 13:23 6m 29s main
January 26, 2024 13:23 6m 29s
fix
Run tests #59: Commit 675ccd8 pushed by vemonet
January 12, 2024 14:15 17m 23s main
January 12, 2024 14:15 17m 23s
improve training to remove grid
Run tests #58: Commit 025bdec pushed by vemonet
January 12, 2024 12:00 17m 10s main
January 12, 2024 12:00 17m 10s
improve training to remove grid
Run tests #57: Commit c7269b6 pushed by vemonet
January 12, 2024 11:59 17m 14s main
January 12, 2024 11:59 17m 14s
fix train
Run tests #56: Commit 823ab88 pushed by vemonet
January 8, 2024 15:02 17m 19s main
January 8, 2024 15:02 17m 19s
Use xbg.train() to run training on GPU and manually perform Cross Val…
Run tests #55: Commit f326a5d pushed by vemonet
December 22, 2023 18:33 17m 23s main
December 22, 2023 18:33 17m 23s
improve cv on gpu
Run tests #54: Commit b91f940 pushed by vemonet
December 19, 2023 15:13 18m 45s main
December 19, 2023 15:13 18m 45s
Merge branch 'main' of github.com:MaastrichtU-IDS/predict-drug-target
Run tests #53: Commit 74a6a68 pushed by vemonet
December 18, 2023 16:07 17m 31s main
December 18, 2023 16:07 17m 31s
add grid search
Run tests #52: Commit 061cbe2 pushed by vemonet
December 13, 2023 11:05 18m 5s main
December 13, 2023 11:05 18m 5s
we can now provide a matrix of the params to test
Run tests #51: Commit 1130373 pushed by vemonet
December 8, 2023 13:24 17m 39s main
December 8, 2023 13:24 17m 39s
comment
Run tests #50: Commit 685250d pushed by vemonet
December 8, 2023 13:13 17m 22s main
December 8, 2023 13:13 17m 22s
fix embeddings generation when no seq found
Run tests #49: Commit 804ebe8 pushed by vemonet
December 8, 2023 13:09 17m 17s main
December 8, 2023 13:09 17m 17s
use gpu for xgboost
Run tests #48: Commit 01692c6 pushed by vemonet
December 8, 2023 13:03 17m 25s main
December 8, 2023 13:03 17m 25s
train drugbank data
Run tests #47: Commit 2c014b8 pushed by vemonet
December 7, 2023 15:15 17m 12s main
December 7, 2023 15:15 17m 12s
we can now train with many different configs
Run tests #46: Commit b137d08 pushed by vemonet
December 7, 2023 14:45 17m 50s main
December 7, 2023 14:45 17m 50s