#646 remove init

src/csvcubed/cli/error_mapping.py

@@ -3,25 +3,15 @@
 from os import linesep
 from typing import Type, Union
 
-from csvcubed.models.cube.qb import (
-    BothMeasureTypesDefinedError,
-    BothUnitTypesDefinedError,
-    CsvColumnUriTemplateMissingError,
-    EmptyQbMultiMeasureDimensionError,
-    MoreThanOneMeasureColumnError,
-    MoreThanOneUnitsColumnError,
-    NoDimensionsDefinedError,
-    NoMeasuresDefinedError,
-    NoObservedValuesColumnDefinedError,
-    NoUnitsDefinedError,
-    QbAttribute,
-    QbCodeList,
-    QbDimension,
-    QbMultiMeasureDimension,
-    QbMultiUnits,
-    QbObservationValue,
+from csvcubed.models.cube.qb.components.attribute import QbAttribute
+from csvcubed.models.cube.qb.components.codelist import QbCodeList
+from csvcubed.models.cube.qb.components.datastructuredefinition import (
     QbStructuralDefinition,
 )
+from csvcubed.models.cube.qb.components.dimension import QbDimension
+from csvcubed.models.cube.qb.components.measuresdimension import QbMultiMeasureDimension
+from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
+from csvcubed.models.cube.qb.components.unitscolumn import QbMultiUnits
 from csvcubed.models.cube.qb.components.validationerrors import (
     ConflictingUriSafeValuesError,
     EmptyQbMultiUnitsError,
@@ -32,10 +22,20 @@
 )
 from csvcubed.models.cube.qb.validationerrors import (
     AttributeNotLinkedError,
+    BothMeasureTypesDefinedError,
+    BothUnitTypesDefinedError,
+    CsvColumnUriTemplateMissingError,
     DuplicateMeasureError,
+    EmptyQbMultiMeasureDimensionError,
     HybridShapeError,
     LinkedObsColumnDoesntExistError,
     LinkedToNonObsColumnError,
+    MoreThanOneMeasureColumnError,
+    MoreThanOneUnitsColumnError,
+    NoDimensionsDefinedError,
+    NoMeasuresDefinedError,
+    NoObservedValuesColumnDefinedError,
+    NoUnitsDefinedError,
     PivotedObsValColWithoutMeasureError,
     PivotedShapeMeasureColumnsExistError,
 )

src/csvcubed/models/codelistconfig/code_list_config.py

@@ -12,8 +12,7 @@
 from csvcubedmodels.dataclassbase import DataClassBase
 
 from csvcubed.models.cube.qb.catalog import CatalogMetadata
-from csvcubed.models.cube.qb.components import NewQbConcept
-from csvcubed.models.cube.qb.components.concept import DuplicatedQbConcept
+from csvcubed.models.cube.qb.components.concept import DuplicatedQbConcept, NewQbConcept
 from csvcubed.readers.catalogmetadata.v1.catalog_metadata_reader import (
     metadata_from_dict,
 )

src/csvcubed/models/cube/qb/__init__.py

@@ -1,4 +0,0 @@
-from .catalog import CatalogMetadata
-from .columns import QbColumn
-from .components import *
-from .validationerrors import *

src/csvcubed/models/cube/qb/components/__init__.py

@@ -1,28 +0,0 @@
-from .arbitraryrdf import RdfSerialisationHint
-from .attribute import (
-    ExistingQbAttribute,
-    ExistingQbAttributeLiteral,
-    NewQbAttribute,
-    NewQbAttributeLiteral,
-    QbAttribute,
-    QbAttributeLiteral,
-)
-from .attributevalue import NewQbAttributeValue
-from .codelist import (
-    CompositeQbCodeList,
-    ExistingQbCodeList,
-    NewQbCodeList,
-    NewQbCodeListInCsvW,
-    QbCodeList,
-)
-from .concept import DuplicatedQbConcept, ExistingQbConcept, NewQbConcept
-from .datastructuredefinition import (
-    QbColumnStructuralDefinition,
-    QbStructuralDefinition,
-)
-from .dimension import ExistingQbDimension, NewQbDimension, QbDimension
-from .measure import ExistingQbMeasure, NewQbMeasure, QbMeasure
-from .measuresdimension import QbMultiMeasureDimension
-from .observedvalue import QbObservationValue
-from .unit import ExistingQbUnit, NewQbUnit, QbUnit
-from .unitscolumn import QbMultiUnits

src/csvcubed/models/cube/qb/validationerrors.py

@@ -10,15 +10,14 @@
 from dataclasses import dataclass, field
 from typing import List, Optional, Type, Union
 
-from csvcubed.models.validationerror import SpecificValidationError
-
-from ..qb import (
-    QbDimension,
-    QbMultiMeasureDimension,
-    QbMultiUnits,
-    QbObservationValue,
+from csvcubed.models.cube.qb.components.datastructuredefinition import (
     QbStructuralDefinition,
 )
+from csvcubed.models.cube.qb.components.dimension import QbDimension
+from csvcubed.models.cube.qb.components.measuresdimension import QbMultiMeasureDimension
+from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
+from csvcubed.models.cube.qb.components.unitscolumn import QbMultiUnits
+from csvcubed.models.validationerror import SpecificValidationError
 
 ComponentTypeDescription = Union[str, Type[QbStructuralDefinition]]
 

src/csvcubed/models/rdf/__init__.py

@@ -1,3 +0,0 @@
-"""
-Contains Models for mapping data to RDF which are unique to the `csvcubed` package.
-"""

src/csvcubed/readers/__init__.py

@@ -1,6 +0,0 @@
-"""
-Readers
--------
-
-Read from the outputs generated by this tool (e.g. CSV-W skos codelists or CSV-qbs).
-"""

src/csvcubed/readers/cubeconfig/v1/columnschema.py

@@ -19,28 +19,30 @@
 from csvcubed.inputs import PandasDataTypes, pandas_input_to_columnar_optional_str
 from csvcubed.models.codelistconfig.code_list_config import CodeListConfig
 from csvcubed.models.cube.cube import CatalogMetadata
-from csvcubed.models.cube.qb.components import (
-    CompositeQbCodeList,
-    DuplicatedQbConcept,
+from csvcubed.models.cube.qb.components.attribute import (
     ExistingQbAttribute,
     ExistingQbAttributeLiteral,
-    ExistingQbCodeList,
-    ExistingQbDimension,
-    ExistingQbMeasure,
-    ExistingQbUnit,
     NewQbAttribute,
     NewQbAttributeLiteral,
     NewQbAttributeValue,
+)
+from csvcubed.models.cube.qb.components.codelist import (
+    CompositeQbCodeList,
+    DuplicatedQbConcept,
+    ExistingQbCodeList,
     NewQbCodeList,
-    NewQbDimension,
-    NewQbMeasure,
-    NewQbUnit,
     QbCodeList,
-    QbMultiMeasureDimension,
-    QbMultiUnits,
-    QbObservationValue,
 )
 from csvcubed.models.cube.qb.components.concept import NewQbConcept
+from csvcubed.models.cube.qb.components.dimension import (
+    ExistingQbDimension,
+    NewQbDimension,
+)
+from csvcubed.models.cube.qb.components.measure import ExistingQbMeasure, NewQbMeasure
+from csvcubed.models.cube.qb.components.measuresdimension import QbMultiMeasureDimension
+from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
+from csvcubed.models.cube.qb.components.unit import ExistingQbUnit, NewQbUnit
+from csvcubed.models.cube.qb.components.unitscolumn import QbMultiUnits
 from csvcubed.models.jsonvalidationerrors import JsonSchemaValidationError
 from csvcubed.readers.cubeconfig.utils import load_resource
 from csvcubed.utils.file import code_list_config_json_exists

src/csvcubed/utils/__init__.py

@@ -1,3 +0,0 @@
-"""
-General utility functions for the :mod:`csvcubed` project.
-"""

src/csvcubed/utils/qb/__init__.py

@@ -1,3 +0,0 @@
-"""
-Utilities which are qb-specific.
-"""

src/csvcubed/utils/qb/cube.py

@@ -9,20 +9,19 @@
 
 from csvcubed.models.cube.cube import Cube
 from csvcubed.models.cube.cube_shape import CubeShape
-from csvcubed.models.cube.qb.components import (
+from csvcubed.models.cube.qb.components.datastructuredefinition import (
     QbColumnStructuralDefinition,
-    QbMeasure,
-    QbMultiMeasureDimension,
-    QbMultiUnits,
-    QbObservationValue,
-    QbUnit,
 )
+from csvcubed.models.cube.qb.components.measure import QbMeasure
+from csvcubed.models.cube.qb.components.measuresdimension import QbMultiMeasureDimension
+from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
+from csvcubed.models.cube.qb.components.unitscolumn import QbMultiUnits, QbUnit
 
 _logger = logging.getLogger(__name__)
 
 
 QbColumnarDsdType = TypeVar("QbColumnarDsdType", bound=QbColumnStructuralDefinition)
-"""Anything which inherits from :class:`ColumnarQbDataStructureDefinition 
+"""Anything which inherits from :class:`ColumnarQbDataStructureDefinition
     <csvcubed.models.cube.qb.components.datastructuredefinition.ColumnarQbDataStructureDefinition>`."""
 
 

src/csvcubed/utils/qb/standardise.py

@@ -10,18 +10,14 @@
 from pandas.core.arrays.categorical import Categorical
 
 from csvcubed.models.cube.cube import QbColumn, QbCube
-from csvcubed.models.cube.qb.components import (
-    NewQbCodeList,
-    NewQbDimension,
-    NewQbMeasure,
-    NewQbUnit,
-    QbAttribute,
-    QbAttributeLiteral,
-    QbDimension,
-    QbMultiMeasureDimension,
-    QbMultiUnits,
-    QbObservationValue,
-)
+from csvcubed.models.cube.qb.components.attribute import QbAttribute, QbAttributeLiteral
+from csvcubed.models.cube.qb.components.codelist import NewQbCodeList
+from csvcubed.models.cube.qb.components.dimension import NewQbDimension, QbDimension
+from csvcubed.models.cube.qb.components.measure import NewQbMeasure
+from csvcubed.models.cube.qb.components.measuresdimension import QbMultiMeasureDimension
+from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
+from csvcubed.models.cube.qb.components.unit import NewQbUnit
+from csvcubed.models.cube.qb.components.unitscolumn import QbMultiUnits
 
 from .cube import get_all_measures, get_all_units
 

src/csvcubed/utils/qb/validation/cube.py

@@ -2,10 +2,9 @@
 
 from csvcubed.models.cube.cube import Cube
 from csvcubed.models.cube.qb.columns import QbColumn
-from csvcubed.models.cube.qb.components import (
+from csvcubed.models.cube.qb.components.attribute import QbAttribute, QbAttributeLiteral
+from csvcubed.models.cube.qb.components.dimension import (
     ExistingQbDimension,
-    QbAttribute,
-    QbAttributeLiteral,
     QbDimension,
 )
 from csvcubed.models.cube.qb.validationerrors import (

src/csvcubed/utils/sparql_handler/__init__.py

@@ -1,3 +0,0 @@
-"""
-General utility functions sparql query handling for the :mod:`csvcubed` project.
-"""

src/csvcubed/utils/validators/__init__.py

@@ -1,3 +0,0 @@
-"""
-pydantic validators for attributes on models.
-"""

src/csvcubed/writers/__init__.py

@@ -1,6 +0,0 @@
-"""
-Writers
--------
-
-Write to output formats like CSV-qb.
-"""

src/csvcubed/writers/skoscodelistwriter.py

@@ -13,7 +13,7 @@
 import pandas as pd
 from csvcubedmodels.rdf import ExistingResource
 
-from csvcubed.models.cube.qb.components import (
+from csvcubed.models.cube.qb.components.codelist import (
     CompositeQbCodeList,
     DuplicatedQbConcept,
     NewQbCodeList,

tests/__init__.py

@@ -1,2 +0,0 @@
-from .behaviour import *
-from .unit import *

tests/unit/cli/inspect/test_inspectdatasetmanager.py

@@ -18,6 +18,7 @@
 )
 from csvcubed.models.csvwtype import CSVWType
 from csvcubed.models.cube.cube_shape import CubeShape
+from csvcubed.models.cube.qb.validationerrors import BothMeasureTypesDefinedError
 from csvcubed.models.inspectdataframeresults import (
     DatasetObservationsByMeasureUnitInfoResult,
     DatasetObservationsInfoResult,

tests/unit/cli/inspect/test_metadataprinter.py

@@ -4,6 +4,7 @@
 from csvcubed.cli.inspect.metadataprinter import MetadataPrinter
 from csvcubed.models.csvwtype import CSVWType
 from csvcubed.models.cube.cube_shape import CubeShape
+from csvcubed.models.cube.qb.validationerrors import BothMeasureTypesDefinedError
 from csvcubed.models.inspectdataframeresults import (
     DatasetObservationsByMeasureUnitInfoResult,
     DatasetObservationsInfoResult,

tests/unit/cube/qb/test_qb_dimension.py

@@ -1,6 +1,7 @@
 import pandas as pd
 
-from csvcubed.models.cube.qb.components import NewQbCodeList, NewQbDimension
+from csvcubed.models.cube.qb.components.codelist import NewQbCodeList
+from csvcubed.models.cube.qb.components.dimension import NewQbDimension
 
 
 def test_newqbdimension_extracts_newqbcodelist_newqbconcept():

tests/unit/cube/qb/test_qb_unit.py

@@ -6,7 +6,7 @@
 import pytest
 
 from csvcubed.definitions import APP_ROOT_DIR_PATH
-from csvcubed.models.cube.qb import QbColumn
+from csvcubed.models.cube.qb.columns import QbColumn
 from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
 from csvcubed.models.cube.qb.components.unit import ExistingQbUnit, NewQbUnit
 from csvcubed.readers.cubeconfig.v1.columnschema import (

tests/unit/readers/cubeconfig/v1_0/test_cube_from_config_json.py

@@ -10,33 +10,31 @@
 from csvcubed.cli.build import build as cli_build
 from csvcubed.definitions import APP_ROOT_DIR_PATH
 from csvcubed.models.cube.cube import Cube
-from csvcubed.models.cube.qb import QbColumn
 from csvcubed.models.cube.qb.catalog import CatalogMetadata
-from csvcubed.models.cube.qb.components import (
-    NewQbAttribute,
-    NewQbCodeList,
-    NewQbConcept,
-    NewQbDimension,
-    NewQbMeasure,
-    NewQbUnit,
-    QbMultiMeasureDimension,
-    QbMultiUnits,
-)
+from csvcubed.models.cube.qb.columns import QbColumn
 from csvcubed.models.cube.qb.components.attribute import (
     ExistingQbAttribute,
     ExistingQbAttributeLiteral,
+    NewQbAttribute,
     NewQbAttributeLiteral,
 )
 from csvcubed.models.cube.qb.components.attributevalue import NewQbAttributeValue
 from csvcubed.models.cube.qb.components.codelist import (
     CompositeQbCodeList,
     ExistingQbCodeList,
+    NewQbCodeList,
+    NewQbConcept,
 )
 from csvcubed.models.cube.qb.components.concept import DuplicatedQbConcept
-from csvcubed.models.cube.qb.components.dimension import ExistingQbDimension
-from csvcubed.models.cube.qb.components.measure import ExistingQbMeasure
+from csvcubed.models.cube.qb.components.dimension import (
+    ExistingQbDimension,
+    NewQbDimension,
+)
+from csvcubed.models.cube.qb.components.measure import ExistingQbMeasure, NewQbMeasure
+from csvcubed.models.cube.qb.components.measuresdimension import QbMultiMeasureDimension
 from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
-from csvcubed.models.cube.qb.components.unit import ExistingQbUnit
+from csvcubed.models.cube.qb.components.unit import ExistingQbUnit, NewQbUnit
+from csvcubed.models.cube.qb.components.unitscolumn import QbMultiUnits
 from csvcubed.readers.catalogmetadata.v1.catalog_metadata_reader import (
     metadata_from_dict,
 )

tests/unit/readers/cubeconfig/v1_0/test_cube_from_convention.py

@@ -12,18 +12,15 @@
 from csvcubed.models.csvcubedexception import UnsupportedColumnDefinitionException
 from csvcubed.models.cube.columns import SuppressedCsvColumn
 from csvcubed.models.cube.cube import Cube
-from csvcubed.models.cube.qb import QbColumn
 from csvcubed.models.cube.qb.catalog import CatalogMetadata
-from csvcubed.models.cube.qb.components import (
-    NewQbCodeList,
-    NewQbConcept,
-    NewQbDimension,
-    NewQbMeasure,
-    NewQbUnit,
-    QbMultiMeasureDimension,
-    QbMultiUnits,
-)
+from csvcubed.models.cube.qb.columns import QbColumn
+from csvcubed.models.cube.qb.components.codelist import NewQbCodeList, NewQbConcept
+from csvcubed.models.cube.qb.components.dimension import NewQbDimension
+from csvcubed.models.cube.qb.components.measure import NewQbMeasure
+from csvcubed.models.cube.qb.components.measuresdimension import QbMultiMeasureDimension
 from csvcubed.models.cube.qb.components.observedvalue import QbObservationValue
+from csvcubed.models.cube.qb.components.unit import NewQbUnit
+from csvcubed.models.cube.qb.components.unitscolumn import QbMultiUnits
 from csvcubed.readers.cubeconfig.v1.configdeserialiser import get_deserialiser
 from csvcubed.utils.iterables import first
 from tests.unit.test_baseunit import get_test_cases_dir

tests/unit/writers/skoscodelistwriter/test_skoscodelistwriter.py

@@ -8,7 +8,10 @@
     RdfSerialisationHint,
     TripleFragment,
 )
-from csvcubed.models.cube.qb.components.codelist import NewQbCodeList
+from csvcubed.models.cube.qb.components.codelist import (
+    CompositeQbCodeList,
+    NewQbCodeList,
+)
 from csvcubed.models.cube.qb.components.concept import NewQbConcept
 from csvcubed.models.cube.uristyle import URIStyle
 from csvcubed.writers.skoscodelistwriter import SkosCodeListWriter