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Add new SomaScan version functionality #84

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merged 4 commits into from
Jan 29, 2024

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stufield
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@stufield stufield commented Jan 26, 2024

main changes

  • Now uses a params dictionary

    • containing commonly used params in the package
    • write_adat(), getAnalyteInfo(), getSomaScanVersion()
  • Added SomaScan version to S3 print method

  • Additional ADAT "get" helpers

Major change (internal)

  • getAdatVersion() now takes the full attributes as its input, rather than attr$Header.Meta

- new `getSomaScanVersion()` and `checkSomaScanVersion()` functions
- reorganized docs to merge with `getAdatVersion()`
- getAdatVersion()` now takes the full attributes
  as its input, rather than `x$Header.Meta`
- updated documentation
- fixes SomaLogic#83
- containing commonly used params in the package
- `write_adat()`, `getAnalyteInfo()`, `getSomaScanVersion()`
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Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (c6e2233) 73.88% compared to head (ebde175) 74.06%.

❗ Current head ebde175 differs from pull request most recent head 955d633. Consider uploading reports for the commit 955d633 to get more accurate results

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Additional details and impacted files
@@            Coverage Diff             @@
##             main      #84      +/-   ##
==========================================
+ Coverage   73.88%   74.06%   +0.17%     
==========================================
  Files          39       39              
  Lines        1455     1465      +10     
==========================================
+ Hits         1075     1085      +10     
  Misses        380      380              

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@stufield stufield self-assigned this Jan 26, 2024
@stufield stufield merged commit c7a60c3 into SomaLogic:main Jan 29, 2024
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Add function getSomaScanVersion()
2 participants