v0.7.2

MCMCBenchmarks v0.7.2

Diff since v0.7.1

Closed issues:

• Release v0.7.1 (#92)

Merged pull requests:

• CompatHelper: bump compat for "Turing" to "0.10" (#94) (@github-actions[bot])
• CompatHelper: bump compat for "CSV" to "0.6" (#95) (@github-actions[bot])
• CompatHelper: bump compat for "Turing" to "0.11" (#96) (@github-actions[bot])
• CompatHelper: bump compat for "DataFrames" to "0.21" (#97) (@github-actions[bot])
• CompatHelper: bump compat for "Turing" to "0.12" (#98) (@github-actions[bot])
• Merge updates for .7.2 (#99) (@itsdfish)

v0.7.1

MCMCBenchmarks v0.7.1

Diff since v0.7.0

Closed issues:

• Release v0.7.0 (#82)

Merged pull requests:

• Add Format Names (#91) (@itsdfish)

v0.7.0

MCMCBenchmarks v0.7.0

Diff since v0.6.0

Closed issues:

• Release MCMCBenchmarks v0.6.0 (#74)

Merged pull requests:

• Updates for MCMCChains 3+ (#81) (@itsdfish)
• CompatHelper: add new compat entry for "Requires" at version "1.0" (#84) (@github-actions[bot])
• CompatHelper: bump compat for "Distributions" to "0.23" (#86) (@github-actions[bot])
• CompatHelper: add new compat entry for "CSV" at version "0.5" (#87) (@github-actions[bot])
• CompatHelper: add new compat entry for "AdvancedHMC" at version "0.2" (#88) (@github-actions[bot])
• CompatHelper: bump compat for "StatsPlots" to "0.14" (#90) (@github-actions[bot])

v0.6.0

MCMCBenchmarks v0.6.0

Diff since v0.5.5

Closed issues:

• Update to v0.5.5 (#68)

Merged pull requests:

• Update to v0.5.5 (#67) (@itsdfish)
• CompatHelper: bump compat for "Turing" to "0.8" (#69) (@github-actions[bot])
• CompatHelper: bump compat for "Distributions" to "0.22" (#70) (@github-actions[bot])
• CompatHelper: bump compat for "SpecialFunctions" to "0.10" (#71) (@github-actions[bot])
• CompatHelper: bump compat for "CmdStan" to "6.0" (#72) (@github-actions[bot])
• Updates for dependencies (#73) (@itsdfish)

v0.5.5

MCMCBenchmarks v0.5.5

Diff since v0.5.3

Closed issues:

• Test with reverse auto-diff (#20)
• Comments Bob Carpenter (#22)
• Add Documentation (#28)
• Release .5.3 (#50)
• Unable to load MCMCBenchmarks (#51)
• Added CompatHelper to all packages in StatisticalRethinking (#52)
• Update to v0.5.4 (#56)
• MCMCChains v1 (#62)
• Separate Models/Benchmarks from package (#64)

Merged pull requests:

• CompatHelper: bump compat for "SpecialFunctions" to "0.9" (#54) (@github-actions[bot])
• CompatHelper: bump compat for "StatsPlots" to "0.13" (#55) (@github-actions[bot])
• CompatHelper: bump compat for "MCMCChains" to "0.4" (#57) (@github-actions[bot])
• CompatHelper: bump compat for "DataFrames" to "0.20" (#58) (@github-actions[bot])
• CompatHelper: bump compat for "LogDensityProblems" to "0.10" (#59) (@github-actions[bot])
• CompatHelper: bump compat for "MCMCChains" to "1.0" (#61) (@github-actions[bot])
• fix deprecated functions (#63) (@itsdfish)
• Move benchmark models to MCMCBenchmarkSuite (#65) (@itsdfish)
• Fix docs (#66) (@itsdfish)

v0.5.3

v0.5.3 (2019-10-05)

Diff since v0.5.2

Closed issues:

• New Release .5.2 (#49)
• Travis fails. Cannot find uuid. (#48)
• Problems with LBA and Turing (#21)

v0.5.2

v0.5.2 (2019-10-03)

Diff since v0.5.1

Closed issues:

• New Release for DynamicHMC update (#47)

v0.5.1

v0.5.1 (2019-09-07)

Diff since v0.5.0

Closed issues:

• New Release (#46)

v0.5.0

v0.5.0 (2019-08-23)

Diff since v0.0.1

Closed issues:

• The LBA model is different between Turing's and Stan's (#43)
• Model for DynamicHMC doesn't use truncated distribution (#38)
• How are keyword parameters passed (#37)
• Pin DynamicHMC and LogDensityProblems (#36)
• Does not run with low Nsamples and Nadapt (#35)
• Fix DataFrame Deprecations (#34)
• Standardize names for cross sampler rhat (#33)
• How do you generate the data for LBA? (#32)
• Drop support for DynamicNUTS (#31)
• Chain ranges differ (#30)
• Inconsistency between preconditoning matrix adaptation methods (#29)
• Add Tests (#27)
• How do I suppose to run this repo locally? (#25)
• Change output directory for figures (#24)
• Status of MCMCBenchmarks (#23)
• Memory differences for parallel and single chains (#19)
• plots for HPD (#18)
• Debugging functionality (#16)
• @JuliaRegistrator register\(\) (#15)
• Maximum iterations for LBA (#14)
• Speed up Stan compilation (#13)
• Sketch of Regression example (#12)
• Saving Dataframe for post processing and adding version info (#10)
• Error handling for DynamicNUTS (#3)
• List of models to add for benchmarking (#1)

Merged pull requests:

• Fix another mismatch in the LBA model and make it type stable (#44) (xukai92)
• Optimize Gaussian model for Turing (#42) (xukai92)
• Make LR model type stable and faster (#41) (xukai92)
• Improve scripts (#40) (xukai92)
• Use mv normal instead of iid normals in Poisson (#39) (xukai92)
• Fix Turing's burn-in samples (#26) (xukai92)

v0.0.1

v0.0.1 (2019-05-27)

Diff since a5e3a27d43dfc4d3d95c8305e5e7691063cb236f

Closed issues:

• Parallelizing the benchmkarks (#11)
• Saving Dataframe for post processing and adding version info (#10)
• Epsilon for DynamicHMC (#9)
• Plotting issue (#8)
• Re-run benchmark and relink figures (#7)
• Domain error for LBA using DynmaicHMC (#6)
• Add subdirs to Examples & Models to store the benchmarks? (#5)
• issues with addColumns! (#4)
• Turn off printing for each sampler (#2)