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Restructure code and rename operator traits #129

Merged
merged 9 commits into from
Jun 19, 2024
Merged

Restructure code and rename operator traits #129

merged 9 commits into from
Jun 19, 2024

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adrhill
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@adrhill adrhill commented Jun 19, 2024 •
edited
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  • add folder src/overloads for overload source files
  • rename operator traits:
    • firstder to der1
    • seconder to der2
    • crossder to der_cross
    • influence tp infl

@adrhill adrhill added the run benchmark Run benchmarks in CI label Jun 19, 2024
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codecov-commenter commented Jun 19, 2024 •
edited
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Codecov Report

Attention: Patch coverage is 90.49587% with 23 lines in your changes missing coverage. Please review.

Project coverage is 86.81%. Comparing base (9b78885) to head (e6b7e7d).

Files Patch % Lines
src/operators.jl 86.90% 11 Missing ⚠️
ext/SparseConnectivityTracerNNlibExt.jl 70.58% 5 Missing ⚠️
src/overloads/hessian_tracer.jl 92.00% 4 Missing ⚠️
src/overloads/connectivity_tracer.jl 88.46% 3 Missing ⚠️
Additional details and impacted files 
@@            Coverage Diff             @@
##             main     #129      +/-   ##
==========================================
+ Coverage   86.48%   86.81%   +0.32%     
==========================================
  Files          31       31              
  Lines        1332     1395      +63     
==========================================
+ Hits         1152     1211      +59     
- Misses        180      184       +4

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

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Benchmark result

Judge result

Benchmark Report for /home/runner/work/SparseConnectivityTracer.jl/SparseConnectivityTracer.jl

Job Properties

  • Time of benchmarks:
    • Target: 19 Jun 2024 - 17:26
    • Baseline: 19 Jun 2024 - 17:41
  • Package commits:
    • Target: bb65bb
    • Baseline: 9b7888
  • Julia commits:
    • Target: 48d4fd
    • Baseline: 48d4fd
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio
["Jacobian", "Global", "BitSet", "Brusselator", "operator", "N=6"] 1.08 (5%) ❌ 1.00 (1%)
["Jacobian", "Global", "BitSet", "Conv", "size=128x128x3"] 1.14 (5%) ❌ 1.00 (1%)
["Jacobian", "Global", "RecursiveSet", "Conv", "size=28x28x3"] 1.08 (5%) ❌ 1.00 (1%)
["Jacobian", "Global", "Set", "Conv", "size=128x128x3"] 0.89 (5%) ✅ 1.00 (1%)
["Jacobian", "Global", "SortedVector", "Brusselator", "operator", "N=6"] 1.05 (5%) ❌ 1.00 (1%)
["Jacobian", "Local", "BitSet", "Brusselator", "operator", "N=6"] 1.06 (5%) ❌ 1.00 (1%)
["Jacobian", "Local", "RecursiveSet", "Conv", "size=28x28x3"] 1.07 (5%) ❌ 1.00 (1%)
["Jacobian", "Local", "SortedVector", "Brusselator", "operator", "N=6"] 1.07 (5%) ❌ 1.00 (1%)
["OptimizationProblems", "britgas", "Hessian"] 0.69 (5%) ✅ 1.00 (1%)
["OptimizationProblems", "britgas", "Jacobian"] 1.07 (5%) ❌ 1.00 (1%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["Jacobian", "Global", "BitSet", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "BitSet", "Brusselator", "operator"]
  • ["Jacobian", "Global", "BitSet", "Conv"]
  • ["Jacobian", "Global", "DuplicateVector", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "DuplicateVector", "Brusselator", "operator"]
  • ["Jacobian", "Global", "DuplicateVector", "Conv"]
  • ["Jacobian", "Global", "RecursiveSet", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "RecursiveSet", "Brusselator", "operator"]
  • ["Jacobian", "Global", "RecursiveSet", "Conv"]
  • ["Jacobian", "Global", "Set", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "Set", "Brusselator", "operator"]
  • ["Jacobian", "Global", "Set", "Conv"]
  • ["Jacobian", "Global", "SortedVector", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "SortedVector", "Brusselator", "operator"]
  • ["Jacobian", "Global", "SortedVector", "Conv"]
  • ["Jacobian", "Local", "BitSet", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "BitSet", "Brusselator", "operator"]
  • ["Jacobian", "Local", "BitSet", "Conv"]
  • ["Jacobian", "Local", "DuplicateVector", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "DuplicateVector", "Brusselator", "operator"]
  • ["Jacobian", "Local", "DuplicateVector", "Conv"]
  • ["Jacobian", "Local", "RecursiveSet", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "RecursiveSet", "Brusselator", "operator"]
  • ["Jacobian", "Local", "RecursiveSet", "Conv"]
  • ["Jacobian", "Local", "Set", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "Set", "Brusselator", "operator"]
  • ["Jacobian", "Local", "Set", "Conv"]
  • ["Jacobian", "Local", "SortedVector", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "SortedVector", "Brusselator", "operator"]
  • ["Jacobian", "Local", "SortedVector", "Conv"]
  • ["OptimizationProblems", "britgas"]

Julia versioninfo

Target

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1022-azure #23~22.04.1-Ubuntu SMP Thu May  9 17:59:24 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3199 MHz       4992 s          2 s        394 s      16864 s          0 s
       #2  3244 MHz       5671 s          0 s        466 s      16111 s          0 s
       #3  2445 MHz       7159 s          1 s        448 s      14653 s          0 s
       #4  2445 MHz       7608 s          0 s        494 s      14148 s          0 s
  Memory: 15.606483459472656 GB (13065.45703125 MB free)
  Uptime: 2230.8 sec
  Load Avg:  1.0  1.01  1.0
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1022-azure #23~22.04.1-Ubuntu SMP Thu May  9 17:59:24 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       6583 s          2 s        510 s      23931 s          0 s
       #2  2445 MHz       8002 s          0 s        626 s      22397 s          0 s
       #3  3243 MHz       8979 s          1 s        593 s      21464 s          0 s
       #4  3287 MHz      10310 s          0 s        668 s      20051 s          0 s
  Memory: 15.606483459472656 GB (13260.71484375 MB free)
  Uptime: 3109.97 sec
  Load Avg:  1.05  1.03  1.0
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Target result

Benchmark Report for /home/runner/work/SparseConnectivityTracer.jl/SparseConnectivityTracer.jl

Job Properties

  • Time of benchmark: 19 Jun 2024 - 17:26
  • Package commit: bb65bb
  • Julia commit: 48d4fd
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["Hessian", "Global", ("BitSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 46.451 ms (5%) 67.95 MiB (1%) 106983
["Hessian", "Global", ("BitSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 194.492 ms (5%) 4.590 ms 345.61 MiB (1%) 287593
["Hessian", "Global", ("BitSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 62.635 ms (5%) 93.95 MiB (1%) 84585
["Hessian", "Global", ("BitSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.110 ms (5%) 10.83 MiB (1%) 23285
["Hessian", "Global", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 467.453 ms (5%) 20.141 ms 1.16 GiB (1%) 792458
["Hessian", "Global", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 208.493 ms (5%) 6.162 ms 420.94 MiB (1%) 450196
["Hessian", "Global", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 138.454 ms (5%) 4.373 ms 252.17 MiB (1%) 726286
["Hessian", "Global", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.720 ms (5%) 17.77 MiB (1%) 17395
["Hessian", "Global", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 336.070 ms (5%) 16.808 ms 751.92 MiB (1%) 633996
["Hessian", "Global", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 231.838 ms (5%) 6.793 ms 384.46 MiB (1%) 691552
["Hessian", "Global", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 147.064 ms (5%) 7.324 ms 316.33 MiB (1%) 953981
["Hessian", "Global", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.289 ms (5%) 14.25 MiB (1%) 58044
["Hessian", "Global", ("Set", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 49.975 ms (5%) 73.10 MiB (1%) 128837
["Hessian", "Global", ("Set", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 224.263 ms (5%) 5.595 ms 380.60 MiB (1%) 316463
["Hessian", "Global", ("Set", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 67.099 ms (5%) 1.655 ms 101.04 MiB (1%) 86774
["Hessian", "Global", ("Set", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.669 ms (5%) 13.83 MiB (1%) 25319
["Hessian", "Global", ("SortedVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 45.012 ms (5%) 65.74 MiB (1%) 85074
["Hessian", "Global", ("SortedVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 192.986 ms (5%) 3.694 ms 342.18 MiB (1%) 218044
["Hessian", "Global", ("SortedVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 62.307 ms (5%) 1.573 ms 99.13 MiB (1%) 51029
["Hessian", "Global", ("SortedVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.577 ms (5%) 14.56 MiB (1%) 17167
["Hessian", "Local", ("BitSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 46.667 ms (5%) 67.96 MiB (1%) 106984
["Hessian", "Local", ("BitSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 195.317 ms (5%) 4.940 ms 345.76 MiB (1%) 287595
["Hessian", "Local", ("BitSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 65.144 ms (5%) 1.656 ms 97.56 MiB (1%) 84881
["Hessian", "Local", ("BitSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.857 ms (5%) 15.49 MiB (1%) 24362
["Hessian", "Local", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 467.325 ms (5%) 21.025 ms 1.16 GiB (1%) 792459
["Hessian", "Local", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 209.028 ms (5%) 7.445 ms 421.08 MiB (1%) 450198
["Hessian", "Local", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 135.313 ms (5%) 4.318 ms 251.92 MiB (1%) 718900
["Hessian", "Local", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.927 ms (5%) 19.18 MiB (1%) 18282
["Hessian", "Local", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 334.983 ms (5%) 16.963 ms 751.92 MiB (1%) 633997
["Hessian", "Local", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 234.530 ms (5%) 7.410 ms 384.61 MiB (1%) 691554
["Hessian", "Local", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 147.954 ms (5%) 7.516 ms 318.45 MiB (1%) 953083
["Hessian", "Local", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.597 ms (5%) 15.78 MiB (1%) 58871
["Hessian", "Local", ("Set", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 50.572 ms (5%) 73.11 MiB (1%) 128838
["Hessian", "Local", ("Set", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 222.935 ms (5%) 5.220 ms 380.75 MiB (1%) 316465
["Hessian", "Local", ("Set", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 67.324 ms (5%) 1.779 ms 99.63 MiB (1%) 86749
["Hessian", "Local", ("Set", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 7.518 ms (5%) 19.95 MiB (1%) 26850
["Hessian", "Local", ("SortedVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 45.046 ms (5%) 65.75 MiB (1%) 85075
["Hessian", "Local", ("SortedVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 193.958 ms (5%) 4.756 ms 342.32 MiB (1%) 218046
["Hessian", "Local", ("SortedVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 57.928 ms (5%) 88.34 MiB (1%) 50320
["Hessian", "Local", ("SortedVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.458 ms (5%) 12.75 MiB (1%) 17676
["Jacobian", "Global", "BitSet", "Brusselator", "ODE", "N=24"] 2.578 ms (5%) 5.81 MiB (1%) 59356
["Jacobian", "Global", "BitSet", "Brusselator", "ODE", "N=6"] 143.760 μs (5%) 255.81 KiB (1%) 2855
["Jacobian", "Global", "BitSet", "Brusselator", "operator", "N=24"] 968.955 μs (5%) 2.05 MiB (1%) 22268
["Jacobian", "Global", "BitSet", "Brusselator", "operator", "N=6"] 53.200 μs (5%) 101.38 KiB (1%) 1182
["Jacobian", "Global", "BitSet", "Conv", "size=128x128x3"] 2.219 s (5%) 897.339 ms 18.61 GiB (1%) 11476655
["Jacobian", "Global", "BitSet", "Conv", "size=28x28x3"] 18.642 ms (5%) 63.25 MiB (1%) 414348
["Jacobian", "Global", "BitSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 8.486 μs (5%) 17.38 KiB (1%) 167
["Jacobian", "Global", "BitSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 278.763 μs (5%) 527.62 KiB (1%) 5807
["Jacobian", "Global", "DuplicateVector", "Brusselator", "ODE", "N=24"] 17.491 ms (5%) 30.12 MiB (1%) 175241
["Jacobian", "Global", "DuplicateVector", "Brusselator", "ODE", "N=6"] 1.075 ms (5%) 1.89 MiB (1%) 11061
["Jacobian", "Global", "DuplicateVector", "Brusselator", "operator", "N=24"] 3.488 ms (5%) 4.33 MiB (1%) 41515
["Jacobian", "Global", "DuplicateVector", "Brusselator", "operator", "N=6"] 214.402 μs (5%) 277.94 KiB (1%) 2621
["Jacobian", "Global", "DuplicateVector", "Conv", "size=128x128x3"] 1.093 s (5%) 64.724 ms 1.02 GiB (1%) 4662061
["Jacobian", "Global", "DuplicateVector", "Conv", "size=28x28x3"] 35.413 ms (5%) 41.58 MiB (1%) 175248
["Jacobian", "Global", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 7.562 μs (5%) 12.75 KiB (1%) 91
["Jacobian", "Global", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 140.442 ms (5%) 5.374 ms 704.67 MiB (1%) 29523
["Jacobian", "Global", "RecursiveSet", "Brusselator", "ODE", "N=24"] 53.482 ms (5%) 25.95 MiB (1%) 214417
["Jacobian", "Global", "RecursiveSet", "Brusselator", "ODE", "N=6"] 3.347 ms (5%) 1.63 MiB (1%) 13517
["Jacobian", "Global", "RecursiveSet", "Brusselator", "operator", "N=24"] 3.414 ms (5%) 5.12 MiB (1%) 55344
["Jacobian", "Global", "RecursiveSet", "Brusselator", "operator", "N=6"] 202.890 μs (5%) 328.94 KiB (1%) 3490
["Jacobian", "Global", "RecursiveSet", "Conv", "size=128x128x3"] 12.389 s (5%) 1.600 s 10.21 GiB (1%) 50889199
["Jacobian", "Global", "RecursiveSet", "Conv", "size=28x28x3"] 371.669 ms (5%) 24.709 ms 384.42 MiB (1%) 1892002
["Jacobian", "Global", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 10.921 μs (5%) 33.30 KiB (1%) 377
["Jacobian", "Global", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 19.884 s (5%) 8.68 MiB (1%) 38992
["Jacobian", "Global", "Set", "Brusselator", "ODE", "N=24"] 11.564 ms (5%) 19.02 MiB (1%) 129169
["Jacobian", "Global", "Set", "Brusselator", "ODE", "N=6"] 650.338 μs (5%) 1.20 MiB (1%) 8189
["Jacobian", "Global", "Set", "Brusselator", "operator", "N=24"] 2.231 ms (5%) 3.96 MiB (1%) 36910
["Jacobian", "Global", "Set", "Brusselator", "operator", "N=6"] 118.612 μs (5%) 254.64 KiB (1%) 2336
["Jacobian", "Global", "Set", "Conv", "size=128x128x3"] 2.515 s (5%) 241.720 ms 3.68 GiB (1%) 24650689
["Jacobian", "Global", "Set", "Conv", "size=28x28x3"] 87.030 ms (5%) 5.536 ms 144.32 MiB (1%) 925914
["Jacobian", "Global", "Set", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 12.163 μs (5%) 34.94 KiB (1%) 295
["Jacobian", "Global", "Set", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 4.168 ms (5%) 8.45 MiB (1%) 25142
["Jacobian", "Global", "SortedVector", "Brusselator", "ODE", "N=24"] 1.916 ms (5%) 4.21 MiB (1%) 22025
["Jacobian", "Global", "SortedVector", "Brusselator", "ODE", "N=6"] 136.235 μs (5%) 277.56 KiB (1%) 1485
["Jacobian", "Global", "SortedVector", "Brusselator", "operator", "N=24"] 605.435 μs (5%) 1.24 MiB (1%) 9259
["Jacobian", "Global", "SortedVector", "Brusselator", "operator", "N=6"] 39.674 μs (5%) 80.50 KiB (1%) 605
["Jacobian", "Global", "SortedVector", "Conv", "size=128x128x3"] 655.751 ms (5%) 65.356 ms 1.02 GiB (1%) 4662061
["Jacobian", "Global", "SortedVector", "Conv", "size=28x28x3"] 18.715 ms (5%) 41.58 MiB (1%) 175248
["Jacobian", "Global", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 7.384 μs (5%) 12.67 KiB (1%) 90
["Jacobian", "Global", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 592.350 μs (5%) 1.99 MiB (1%) 2987
["Jacobian", "Local", "BitSet", "Brusselator", "ODE", "N=24"] 2.571 ms (5%) 5.91 MiB (1%) 59360
["Jacobian", "Local", "BitSet", "Brusselator", "ODE", "N=6"] 146.184 μs (5%) 262.08 KiB (1%) 2857
["Jacobian", "Local", "BitSet", "Brusselator", "operator", "N=24"] 981.449 μs (5%) 2.11 MiB (1%) 22273
["Jacobian", "Local", "BitSet", "Brusselator", "operator", "N=6"] 54.673 μs (5%) 105.56 KiB (1%) 1185
["Jacobian", "Local", "BitSet", "Conv", "size=128x128x3"] 2.096 s (5%) 586.913 ms 18.61 GiB (1%) 11476667
["Jacobian", "Local", "BitSet", "Conv", "size=28x28x3"] 18.501 ms (5%) 63.37 MiB (1%) 414359
["Jacobian", "Local", "BitSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 8.856 μs (5%) 24.94 KiB (1%) 157
["Jacobian", "Local", "BitSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 283.321 μs (5%) 538.02 KiB (1%) 5829
["Jacobian", "Local", "DuplicateVector", "Brusselator", "ODE", "N=24"] 17.488 ms (5%) 30.22 MiB (1%) 175245
["Jacobian", "Local", "DuplicateVector", "Brusselator", "ODE", "N=6"] 1.074 ms (5%) 1.90 MiB (1%) 11063
["Jacobian", "Local", "DuplicateVector", "Brusselator", "operator", "N=24"] 3.502 ms (5%) 4.39 MiB (1%) 41520
["Jacobian", "Local", "DuplicateVector", "Brusselator", "operator", "N=6"] 216.667 μs (5%) 282.12 KiB (1%) 2624
["Jacobian", "Local", "DuplicateVector", "Conv", "size=128x128x3"] 1.133 s (5%) 95.947 ms 1.02 GiB (1%) 4662073
["Jacobian", "Local", "DuplicateVector", "Conv", "size=28x28x3"] 35.609 ms (5%) 41.69 MiB (1%) 175259
["Jacobian", "Local", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 8.085 μs (5%) 20.91 KiB (1%) 91
["Jacobian", "Local", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 146.893 ms (5%) 4.188 ms 800.68 MiB (1%) 29599
["Jacobian", "Local", "RecursiveSet", "Brusselator", "ODE", "N=24"] 53.488 ms (5%) 26.04 MiB (1%) 214421
["Jacobian", "Local", "RecursiveSet", "Brusselator", "ODE", "N=6"] 3.354 ms (5%) 1.64 MiB (1%) 13519
["Jacobian", "Local", "RecursiveSet", "Brusselator", "operator", "N=24"] 3.434 ms (5%) 5.18 MiB (1%) 55349
["Jacobian", "Local", "RecursiveSet", "Brusselator", "operator", "N=6"] 204.884 μs (5%) 333.12 KiB (1%) 3493
["Jacobian", "Local", "RecursiveSet", "Conv", "size=128x128x3"] 12.913 s (5%) 1.966 s 10.21 GiB (1%) 50889211
["Jacobian", "Local", "RecursiveSet", "Conv", "size=28x28x3"] 385.394 ms (5%) 24.788 ms 384.54 MiB (1%) 1892013
["Jacobian", "Local", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 12.384 μs (5%) 43.03 KiB (1%) 388
["Jacobian", "Local", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 18.187 s (5%) 8.69 MiB (1%) 38902
["Jacobian", "Local", "Set", "Brusselator", "ODE", "N=24"] 11.582 ms (5%) 19.12 MiB (1%) 129173
["Jacobian", "Local", "Set", "Brusselator", "ODE", "N=6"] 654.747 μs (5%) 1.20 MiB (1%) 8191
["Jacobian", "Local", "Set", "Brusselator", "operator", "N=24"] 2.252 ms (5%) 4.02 MiB (1%) 36915
["Jacobian", "Local", "Set", "Brusselator", "operator", "N=6"] 120.576 μs (5%) 258.83 KiB (1%) 2339
["Jacobian", "Local", "Set", "Conv", "size=128x128x3"] 2.540 s (5%) 252.384 ms 3.69 GiB (1%) 24650701
["Jacobian", "Local", "Set", "Conv", "size=28x28x3"] 87.974 ms (5%) 6.229 ms 144.43 MiB (1%) 925925
["Jacobian", "Local", "Set", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 12.833 μs (5%) 44.03 KiB (1%) 305
["Jacobian", "Local", "Set", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 4.094 ms (5%) 8.42 MiB (1%) 25068
["Jacobian", "Local", "SortedVector", "Brusselator", "ODE", "N=24"] 1.943 ms (5%) 4.31 MiB (1%) 22029
["Jacobian", "Local", "SortedVector", "Brusselator", "ODE", "N=6"] 141.695 μs (5%) 283.83 KiB (1%) 1487
["Jacobian", "Local", "SortedVector", "Brusselator", "operator", "N=24"] 625.662 μs (5%) 1.31 MiB (1%) 9264
["Jacobian", "Local", "SortedVector", "Brusselator", "operator", "N=6"] 41.527 μs (5%) 84.69 KiB (1%) 608
["Jacobian", "Local", "SortedVector", "Conv", "size=128x128x3"] 661.332 ms (5%) 65.952 ms 1.02 GiB (1%) 4662073
["Jacobian", "Local", "SortedVector", "Conv", "size=28x28x3"] 18.995 ms (5%) 41.69 MiB (1%) 175259
["Jacobian", "Local", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 8.048 μs (5%) 22.03 KiB (1%) 97
["Jacobian", "Local", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 588.654 μs (5%) 1.95 MiB (1%) 2993
["OptimizationProblems", "britgas", "Hessian"] 4.987 ms (5%) 10.40 MiB (1%) 34698
["OptimizationProblems", "britgas", "Jacobian"] 298.339 μs (5%) 456.09 KiB (1%) 5668

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["Hessian", "Global", ("BitSet", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("BitSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("DuplicateVector", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("DuplicateVector", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("RecursiveSet", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("RecursiveSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("Set", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("Set", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("SortedVector", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("SortedVector", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("BitSet", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("BitSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("DuplicateVector", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("DuplicateVector", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("RecursiveSet", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("RecursiveSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("Set", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("Set", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("SortedVector", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("SortedVector", "Set"), "RandomSparsity"]
  • ["Jacobian", "Global", "BitSet", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "BitSet", "Brusselator", "operator"]
  • ["Jacobian", "Global", "BitSet", "Conv"]
  • ["Jacobian", "Global", "BitSet", "SparseMul"]
  • ["Jacobian", "Global", "DuplicateVector", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "DuplicateVector", "Brusselator", "operator"]
  • ["Jacobian", "Global", "DuplicateVector", "Conv"]
  • ["Jacobian", "Global", "DuplicateVector", "SparseMul"]
  • ["Jacobian", "Global", "RecursiveSet", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "RecursiveSet", "Brusselator", "operator"]
  • ["Jacobian", "Global", "RecursiveSet", "Conv"]
  • ["Jacobian", "Global", "RecursiveSet", "SparseMul"]
  • ["Jacobian", "Global", "Set", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "Set", "Brusselator", "operator"]
  • ["Jacobian", "Global", "Set", "Conv"]
  • ["Jacobian", "Global", "Set", "SparseMul"]
  • ["Jacobian", "Global", "SortedVector", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "SortedVector", "Brusselator", "operator"]
  • ["Jacobian", "Global", "SortedVector", "Conv"]
  • ["Jacobian", "Global", "SortedVector", "SparseMul"]
  • ["Jacobian", "Local", "BitSet", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "BitSet", "Brusselator", "operator"]
  • ["Jacobian", "Local", "BitSet", "Conv"]
  • ["Jacobian", "Local", "BitSet", "SparseMul"]
  • ["Jacobian", "Local", "DuplicateVector", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "DuplicateVector", "Brusselator", "operator"]
  • ["Jacobian", "Local", "DuplicateVector", "Conv"]
  • ["Jacobian", "Local", "DuplicateVector", "SparseMul"]
  • ["Jacobian", "Local", "RecursiveSet", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "RecursiveSet", "Brusselator", "operator"]
  • ["Jacobian", "Local", "RecursiveSet", "Conv"]
  • ["Jacobian", "Local", "RecursiveSet", "SparseMul"]
  • ["Jacobian", "Local", "Set", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "Set", "Brusselator", "operator"]
  • ["Jacobian", "Local", "Set", "Conv"]
  • ["Jacobian", "Local", "Set", "SparseMul"]
  • ["Jacobian", "Local", "SortedVector", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "SortedVector", "Brusselator", "operator"]
  • ["Jacobian", "Local", "SortedVector", "Conv"]
  • ["Jacobian", "Local", "SortedVector", "SparseMul"]
  • ["OptimizationProblems", "britgas"]

Julia versioninfo

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1022-azure #23~22.04.1-Ubuntu SMP Thu May  9 17:59:24 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3199 MHz       4992 s          2 s        394 s      16864 s          0 s
       #2  3244 MHz       5671 s          0 s        466 s      16111 s          0 s
       #3  2445 MHz       7159 s          1 s        448 s      14653 s          0 s
       #4  2445 MHz       7608 s          0 s        494 s      14148 s          0 s
  Memory: 15.606483459472656 GB (13065.45703125 MB free)
  Uptime: 2230.8 sec
  Load Avg:  1.0  1.01  1.0
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline result

Benchmark Report for /home/runner/work/SparseConnectivityTracer.jl/SparseConnectivityTracer.jl

Job Properties

  • Time of benchmark: 19 Jun 2024 - 17:41
  • Package commit: 9b7888
  • Julia commit: 48d4fd
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["Hessian", "Global", ("BitSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 46.308 ms (5%) 67.95 MiB (1%) 106983
["Hessian", "Global", ("BitSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 198.365 ms (5%) 5.416 ms 345.61 MiB (1%) 287593
["Hessian", "Global", ("BitSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 64.089 ms (5%) 92.01 MiB (1%) 84409
["Hessian", "Global", ("BitSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.336 ms (5%) 11.20 MiB (1%) 23297
["Hessian", "Global", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 493.163 ms (5%) 23.330 ms 1.16 GiB (1%) 792458
["Hessian", "Global", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 212.206 ms (5%) 6.329 ms 420.94 MiB (1%) 450196
["Hessian", "Global", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 138.797 ms (5%) 4.907 ms 250.59 MiB (1%) 726135
["Hessian", "Global", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.152 ms (5%) 12.15 MiB (1%) 16850
["Hessian", "Global", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 344.548 ms (5%) 19.324 ms 751.92 MiB (1%) 633996
["Hessian", "Global", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 226.105 ms (5%) 9.094 ms 384.46 MiB (1%) 691552
["Hessian", "Global", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 146.395 ms (5%) 7.262 ms 311.67 MiB (1%) 946434
["Hessian", "Global", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.517 ms (5%) 14.54 MiB (1%) 58087
["Hessian", "Global", ("Set", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 49.712 ms (5%) 73.10 MiB (1%) 128837
["Hessian", "Global", ("Set", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 229.113 ms (5%) 7.128 ms 380.60 MiB (1%) 316463
["Hessian", "Global", ("Set", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 66.051 ms (5%) 98.88 MiB (1%) 86453
["Hessian", "Global", ("Set", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.798 ms (5%) 13.75 MiB (1%) 25276
["Hessian", "Global", ("SortedVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 44.965 ms (5%) 65.74 MiB (1%) 85074
["Hessian", "Global", ("SortedVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 197.512 ms (5%) 5.223 ms 342.18 MiB (1%) 218044
["Hessian", "Global", ("SortedVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 61.468 ms (5%) 1.612 ms 92.24 MiB (1%) 50338
["Hessian", "Global", ("SortedVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.114 ms (5%) 17.85 MiB (1%) 17564
["Hessian", "Local", ("BitSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 46.541 ms (5%) 67.96 MiB (1%) 106984
["Hessian", "Local", ("BitSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 197.572 ms (5%) 5.023 ms 345.76 MiB (1%) 287595
["Hessian", "Local", ("BitSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 65.126 ms (5%) 1.792 ms 96.16 MiB (1%) 84812
["Hessian", "Local", ("BitSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.729 ms (5%) 13.43 MiB (1%) 24168
["Hessian", "Local", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 495.633 ms (5%) 23.331 ms 1.16 GiB (1%) 792459
["Hessian", "Local", ("DuplicateVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 213.327 ms (5%) 6.407 ms 421.08 MiB (1%) 450198
["Hessian", "Local", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 138.253 ms (5%) 5.408 ms 250.51 MiB (1%) 717731
["Hessian", "Local", ("DuplicateVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 5.404 ms (5%) 13.35 MiB (1%) 17649
["Hessian", "Local", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 346.233 ms (5%) 20.404 ms 751.92 MiB (1%) 633997
["Hessian", "Local", ("RecursiveSet", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 234.479 ms (5%) 11.840 ms 384.61 MiB (1%) 691554
["Hessian", "Local", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 149.198 ms (5%) 8.021 ms 315.54 MiB (1%) 954698
["Hessian", "Local", ("RecursiveSet", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.716 ms (5%) 15.56 MiB (1%) 58839
["Hessian", "Local", ("Set", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 49.906 ms (5%) 73.11 MiB (1%) 128838
["Hessian", "Local", ("Set", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 226.054 ms (5%) 5.793 ms 380.75 MiB (1%) 316465
["Hessian", "Local", ("Set", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 68.594 ms (5%) 1.875 ms 102.68 MiB (1%) 87072
["Hessian", "Local", ("Set", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 7.150 ms (5%) 15.40 MiB (1%) 26201
["Hessian", "Local", ("SortedVector", "Set"), "ArrowHead", (:(N = 200), :(K = 16))] 44.960 ms (5%) 65.75 MiB (1%) 85075
["Hessian", "Local", ("SortedVector", "Set"), "ArrowHead", (:(N = 3200), :(K = 2))] 196.540 ms (5%) 4.266 ms 342.32 MiB (1%) 218046
["Hessian", "Local", ("SortedVector", "Set"), "RandomSparsity", (:(N = 100), :(K = 32))] 59.061 ms (5%) 89.34 MiB (1%) 50350
["Hessian", "Local", ("SortedVector", "Set"), "RandomSparsity", (:(N = 400), :(K = 2))] 6.016 ms (5%) 16.52 MiB (1%) 18026
["Jacobian", "Global", "BitSet", "Brusselator", "ODE", "N=24"] 2.462 ms (5%) 5.81 MiB (1%) 59356
["Jacobian", "Global", "BitSet", "Brusselator", "ODE", "N=6"] 138.981 μs (5%) 255.81 KiB (1%) 2855
["Jacobian", "Global", "BitSet", "Brusselator", "operator", "N=24"] 929.441 μs (5%) 2.05 MiB (1%) 22268
["Jacobian", "Global", "BitSet", "Brusselator", "operator", "N=6"] 49.052 μs (5%) 101.38 KiB (1%) 1182
["Jacobian", "Global", "BitSet", "Conv", "size=128x128x3"] 1.949 s (5%) 274.047 ms 18.61 GiB (1%) 11476655
["Jacobian", "Global", "BitSet", "Conv", "size=28x28x3"] 18.121 ms (5%) 63.25 MiB (1%) 414348
["Jacobian", "Global", "BitSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 7.725 μs (5%) 15.05 KiB (1%) 143
["Jacobian", "Global", "BitSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 267.952 μs (5%) 532.88 KiB (1%) 5891
["Jacobian", "Global", "DuplicateVector", "Brusselator", "ODE", "N=24"] 17.228 ms (5%) 30.12 MiB (1%) 175241
["Jacobian", "Global", "DuplicateVector", "Brusselator", "ODE", "N=6"] 1.059 ms (5%) 1.89 MiB (1%) 11061
["Jacobian", "Global", "DuplicateVector", "Brusselator", "operator", "N=24"] 3.491 ms (5%) 4.33 MiB (1%) 41515
["Jacobian", "Global", "DuplicateVector", "Brusselator", "operator", "N=6"] 215.985 μs (5%) 277.94 KiB (1%) 2621
["Jacobian", "Global", "DuplicateVector", "Conv", "size=128x128x3"] 1.083 s (5%) 59.002 ms 1.02 GiB (1%) 4662061
["Jacobian", "Global", "DuplicateVector", "Conv", "size=28x28x3"] 35.400 ms (5%) 41.58 MiB (1%) 175248
["Jacobian", "Global", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 7.444 μs (5%) 12.58 KiB (1%) 89
["Jacobian", "Global", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 166.789 ms (5%) 5.635 ms 866.04 MiB (1%) 29699
["Jacobian", "Global", "RecursiveSet", "Brusselator", "ODE", "N=24"] 52.698 ms (5%) 25.95 MiB (1%) 214417
["Jacobian", "Global", "RecursiveSet", "Brusselator", "ODE", "N=6"] 3.308 ms (5%) 1.63 MiB (1%) 13517
["Jacobian", "Global", "RecursiveSet", "Brusselator", "operator", "N=24"] 3.382 ms (5%) 5.12 MiB (1%) 55344
["Jacobian", "Global", "RecursiveSet", "Brusselator", "operator", "N=6"] 200.215 μs (5%) 328.94 KiB (1%) 3490
["Jacobian", "Global", "RecursiveSet", "Conv", "size=128x128x3"] 12.216 s (5%) 1.737 s 10.21 GiB (1%) 50889199
["Jacobian", "Global", "RecursiveSet", "Conv", "size=28x28x3"] 344.856 ms (5%) 20.086 ms 384.42 MiB (1%) 1892002
["Jacobian", "Global", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 12.593 μs (5%) 35.67 KiB (1%) 398
["Jacobian", "Global", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 19.740 s (5%) 8.68 MiB (1%) 38936
["Jacobian", "Global", "Set", "Brusselator", "ODE", "N=24"] 11.359 ms (5%) 19.02 MiB (1%) 129169
["Jacobian", "Global", "Set", "Brusselator", "ODE", "N=6"] 638.286 μs (5%) 1.20 MiB (1%) 8189
["Jacobian", "Global", "Set", "Brusselator", "operator", "N=24"] 2.189 ms (5%) 3.96 MiB (1%) 36910
["Jacobian", "Global", "Set", "Brusselator", "operator", "N=6"] 115.326 μs (5%) 254.64 KiB (1%) 2336
["Jacobian", "Global", "Set", "Conv", "size=128x128x3"] 2.817 s (5%) 519.844 ms 3.68 GiB (1%) 24650689
["Jacobian", "Global", "Set", "Conv", "size=28x28x3"] 88.555 ms (5%) 5.310 ms 144.32 MiB (1%) 925914
["Jacobian", "Global", "Set", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 12.454 μs (5%) 34.14 KiB (1%) 287
["Jacobian", "Global", "Set", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 3.948 ms (5%) 8.38 MiB (1%) 24814
["Jacobian", "Global", "SortedVector", "Brusselator", "ODE", "N=24"] 1.870 ms (5%) 4.21 MiB (1%) 22025
["Jacobian", "Global", "SortedVector", "Brusselator", "ODE", "N=6"] 132.639 μs (5%) 277.56 KiB (1%) 1485
["Jacobian", "Global", "SortedVector", "Brusselator", "operator", "N=24"] 577.141 μs (5%) 1.24 MiB (1%) 9259
["Jacobian", "Global", "SortedVector", "Brusselator", "operator", "N=6"] 37.640 μs (5%) 80.50 KiB (1%) 605
["Jacobian", "Global", "SortedVector", "Conv", "size=128x128x3"] 633.712 ms (5%) 76.104 ms 1.02 GiB (1%) 4662061
["Jacobian", "Global", "SortedVector", "Conv", "size=28x28x3"] 19.133 ms (5%) 41.58 MiB (1%) 175248
["Jacobian", "Global", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 6.633 μs (5%) 11.39 KiB (1%) 82
["Jacobian", "Global", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 554.619 μs (5%) 1.95 MiB (1%) 2984
["Jacobian", "Local", "BitSet", "Brusselator", "ODE", "N=24"] 2.514 ms (5%) 5.91 MiB (1%) 59360
["Jacobian", "Local", "BitSet", "Brusselator", "ODE", "N=6"] 140.583 μs (5%) 262.08 KiB (1%) 2857
["Jacobian", "Local", "BitSet", "Brusselator", "operator", "N=24"] 962.794 μs (5%) 2.11 MiB (1%) 22273
["Jacobian", "Local", "BitSet", "Brusselator", "operator", "N=6"] 51.576 μs (5%) 105.56 KiB (1%) 1185
["Jacobian", "Local", "BitSet", "Conv", "size=128x128x3"] 2.043 s (5%) 322.661 ms 18.61 GiB (1%) 11476667
["Jacobian", "Local", "BitSet", "Conv", "size=28x28x3"] 18.352 ms (5%) 63.37 MiB (1%) 414359
["Jacobian", "Local", "BitSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 9.167 μs (5%) 25.31 KiB (1%) 163
["Jacobian", "Local", "BitSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 277.059 μs (5%) 548.89 KiB (1%) 6003
["Jacobian", "Local", "DuplicateVector", "Brusselator", "ODE", "N=24"] 17.570 ms (5%) 30.22 MiB (1%) 175245
["Jacobian", "Local", "DuplicateVector", "Brusselator", "ODE", "N=6"] 1.069 ms (5%) 1.90 MiB (1%) 11063
["Jacobian", "Local", "DuplicateVector", "Brusselator", "operator", "N=24"] 3.530 ms (5%) 4.39 MiB (1%) 41520
["Jacobian", "Local", "DuplicateVector", "Brusselator", "operator", "N=6"] 217.838 μs (5%) 282.12 KiB (1%) 2624
["Jacobian", "Local", "DuplicateVector", "Conv", "size=128x128x3"] 1.125 s (5%) 90.251 ms 1.02 GiB (1%) 4662073
["Jacobian", "Local", "DuplicateVector", "Conv", "size=28x28x3"] 35.994 ms (5%) 41.69 MiB (1%) 175259
["Jacobian", "Local", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 7.354 μs (5%) 20.67 KiB (1%) 88
["Jacobian", "Local", "DuplicateVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 168.403 ms (5%) 5.548 ms 842.76 MiB (1%) 29629
["Jacobian", "Local", "RecursiveSet", "Brusselator", "ODE", "N=24"] 52.857 ms (5%) 26.04 MiB (1%) 214421
["Jacobian", "Local", "RecursiveSet", "Brusselator", "ODE", "N=6"] 3.325 ms (5%) 1.64 MiB (1%) 13519
["Jacobian", "Local", "RecursiveSet", "Brusselator", "operator", "N=24"] 3.416 ms (5%) 5.18 MiB (1%) 55349
["Jacobian", "Local", "RecursiveSet", "Brusselator", "operator", "N=6"] 201.648 μs (5%) 333.12 KiB (1%) 3493
["Jacobian", "Local", "RecursiveSet", "Conv", "size=128x128x3"] 12.768 s (5%) 1.950 s 10.21 GiB (1%) 50889211
["Jacobian", "Local", "RecursiveSet", "Conv", "size=28x28x3"] 361.461 ms (5%) 26.208 ms 384.54 MiB (1%) 1892013
["Jacobian", "Local", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 12.583 μs (5%) 43.12 KiB (1%) 391
["Jacobian", "Local", "RecursiveSet", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 22.370 s (5%) 8.69 MiB (1%) 39002
["Jacobian", "Local", "Set", "Brusselator", "ODE", "N=24"] 11.592 ms (5%) 19.12 MiB (1%) 129173
["Jacobian", "Local", "Set", "Brusselator", "ODE", "N=6"] 644.818 μs (5%) 1.20 MiB (1%) 8191
["Jacobian", "Local", "Set", "Brusselator", "operator", "N=24"] 2.145 ms (5%) 4.02 MiB (1%) 36915
["Jacobian", "Local", "Set", "Brusselator", "operator", "N=6"] 115.136 μs (5%) 258.83 KiB (1%) 2339
["Jacobian", "Local", "Set", "Conv", "size=128x128x3"] 2.527 s (5%) 240.423 ms 3.69 GiB (1%) 24650701
["Jacobian", "Local", "Set", "Conv", "size=28x28x3"] 87.464 ms (5%) 4.859 ms 144.43 MiB (1%) 925925
["Jacobian", "Local", "Set", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 13.796 μs (5%) 45.48 KiB (1%) 315
["Jacobian", "Local", "Set", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 4.152 ms (5%) 8.70 MiB (1%) 25759
["Jacobian", "Local", "SortedVector", "Brusselator", "ODE", "N=24"] 1.898 ms (5%) 4.31 MiB (1%) 22029
["Jacobian", "Local", "SortedVector", "Brusselator", "ODE", "N=6"] 135.234 μs (5%) 283.83 KiB (1%) 1487
["Jacobian", "Local", "SortedVector", "Brusselator", "operator", "N=24"] 596.688 μs (5%) 1.31 MiB (1%) 9264
["Jacobian", "Local", "SortedVector", "Brusselator", "operator", "N=6"] 38.943 μs (5%) 84.69 KiB (1%) 608
["Jacobian", "Local", "SortedVector", "Conv", "size=128x128x3"] 669.752 ms (5%) 64.545 ms 1.02 GiB (1%) 4662073
["Jacobian", "Local", "SortedVector", "Conv", "size=28x28x3"] 19.528 ms (5%) 41.69 MiB (1%) 175259
["Jacobian", "Local", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.01), :(depth = 5))] 8.015 μs (5%) 20.67 KiB (1%) 88
["Jacobian", "Local", "SortedVector", "SparseMul", (:(n = 50), :(p = 0.25), :(depth = 5))] 567.593 μs (5%) 2.01 MiB (1%) 2998
["OptimizationProblems", "britgas", "Hessian"] 7.186 ms (5%) 10.40 MiB (1%) 34698
["OptimizationProblems", "britgas", "Jacobian"] 278.261 μs (5%) 456.09 KiB (1%) 5668

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["Hessian", "Global", ("BitSet", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("BitSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("DuplicateVector", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("DuplicateVector", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("RecursiveSet", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("RecursiveSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("Set", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("Set", "Set"), "RandomSparsity"]
  • ["Hessian", "Global", ("SortedVector", "Set"), "ArrowHead"]
  • ["Hessian", "Global", ("SortedVector", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("BitSet", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("BitSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("DuplicateVector", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("DuplicateVector", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("RecursiveSet", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("RecursiveSet", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("Set", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("Set", "Set"), "RandomSparsity"]
  • ["Hessian", "Local", ("SortedVector", "Set"), "ArrowHead"]
  • ["Hessian", "Local", ("SortedVector", "Set"), "RandomSparsity"]
  • ["Jacobian", "Global", "BitSet", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "BitSet", "Brusselator", "operator"]
  • ["Jacobian", "Global", "BitSet", "Conv"]
  • ["Jacobian", "Global", "BitSet", "SparseMul"]
  • ["Jacobian", "Global", "DuplicateVector", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "DuplicateVector", "Brusselator", "operator"]
  • ["Jacobian", "Global", "DuplicateVector", "Conv"]
  • ["Jacobian", "Global", "DuplicateVector", "SparseMul"]
  • ["Jacobian", "Global", "RecursiveSet", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "RecursiveSet", "Brusselator", "operator"]
  • ["Jacobian", "Global", "RecursiveSet", "Conv"]
  • ["Jacobian", "Global", "RecursiveSet", "SparseMul"]
  • ["Jacobian", "Global", "Set", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "Set", "Brusselator", "operator"]
  • ["Jacobian", "Global", "Set", "Conv"]
  • ["Jacobian", "Global", "Set", "SparseMul"]
  • ["Jacobian", "Global", "SortedVector", "Brusselator", "ODE"]
  • ["Jacobian", "Global", "SortedVector", "Brusselator", "operator"]
  • ["Jacobian", "Global", "SortedVector", "Conv"]
  • ["Jacobian", "Global", "SortedVector", "SparseMul"]
  • ["Jacobian", "Local", "BitSet", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "BitSet", "Brusselator", "operator"]
  • ["Jacobian", "Local", "BitSet", "Conv"]
  • ["Jacobian", "Local", "BitSet", "SparseMul"]
  • ["Jacobian", "Local", "DuplicateVector", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "DuplicateVector", "Brusselator", "operator"]
  • ["Jacobian", "Local", "DuplicateVector", "Conv"]
  • ["Jacobian", "Local", "DuplicateVector", "SparseMul"]
  • ["Jacobian", "Local", "RecursiveSet", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "RecursiveSet", "Brusselator", "operator"]
  • ["Jacobian", "Local", "RecursiveSet", "Conv"]
  • ["Jacobian", "Local", "RecursiveSet", "SparseMul"]
  • ["Jacobian", "Local", "Set", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "Set", "Brusselator", "operator"]
  • ["Jacobian", "Local", "Set", "Conv"]
  • ["Jacobian", "Local", "Set", "SparseMul"]
  • ["Jacobian", "Local", "SortedVector", "Brusselator", "ODE"]
  • ["Jacobian", "Local", "SortedVector", "Brusselator", "operator"]
  • ["Jacobian", "Local", "SortedVector", "Conv"]
  • ["Jacobian", "Local", "SortedVector", "SparseMul"]
  • ["OptimizationProblems", "britgas"]

Julia versioninfo

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1022-azure #23~22.04.1-Ubuntu SMP Thu May  9 17:59:24 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       6583 s          2 s        510 s      23931 s          0 s
       #2  2445 MHz       8002 s          0 s        626 s      22397 s          0 s
       #3  3243 MHz       8979 s          1 s        593 s      21464 s          0 s
       #4  3287 MHz      10310 s          0 s        668 s      20051 s          0 s
  Memory: 15.606483459472656 GB (13260.71484375 MB free)
  Uptime: 3109.97 sec
  Load Avg:  1.05  1.03  1.0
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Runtime information

Runtime Info
BLAS #threads 2
BLAS.vendor() lbt
Sys.CPU_THREADS 4

lscpu output:

Architecture:                       x86_64
CPU op-mode(s):                     32-bit, 64-bit
Address sizes:                      48 bits physical, 48 bits virtual
Byte Order:                         Little Endian
CPU(s):                             4
On-line CPU(s) list:                0-3
Vendor ID:                          AuthenticAMD
Model name:                         AMD EPYC 7763 64-Core Processor
CPU family:                         25
Model:                              1
Thread(s) per core:                 2
Core(s) per socket:                 2
Socket(s):                          1
Stepping:                           1
BogoMIPS:                           4890.85
Flags:                              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl tsc_reliable nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm cmp_legacy svm cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw topoext invpcid_single vmmcall fsgsbase bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves clzero xsaveerptr rdpru arat npt nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold v_vmsave_vmload umip vaes vpclmulqdq rdpid fsrm
Virtualization:                     AMD-V
Hypervisor vendor:                  Microsoft
Virtualization type:                full
L1d cache:                          64 KiB (2 instances)
L1i cache:                          64 KiB (2 instances)
L2 cache:                           1 MiB (2 instances)
L3 cache:                           32 MiB (1 instance)
NUMA node(s):                       1
NUMA node0 CPU(s):                  0-3
Vulnerability Gather data sampling: Not affected
Vulnerability Itlb multihit:        Not affected
Vulnerability L1tf:                 Not affected
Vulnerability Mds:                  Not affected
Vulnerability Meltdown:             Not affected
Vulnerability Mmio stale data:      Not affected
Vulnerability Retbleed:             Not affected
Vulnerability Spec rstack overflow: Vulnerable: Safe RET, no microcode
Vulnerability Spec store bypass:    Vulnerable
Vulnerability Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:           Mitigation; Retpolines; STIBP disabled; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected
Vulnerability Srbds:                Not affected
Vulnerability Tsx async abort:      Not affected
Cpu Property Value
Brand AMD EPYC 7763 64-Core Processor
Vendor :AMD
Architecture :Unknown
Model Family: 0xaf, Model: 0x01, Stepping: 0x01, Type: 0x00
Cores 16 physical cores, 16 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (32, 512, 32768) kbytes
64 byte cache line size
Address Size 48 bits virtual, 48 bits physical
SIMD 256 bit = 32 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC runs at constant rate (invariant from clock frequency)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

@adrhill adrhill removed the run benchmark Run benchmarks in CI label Jun 19, 2024
@adrhill adrhill changed the title Move @noinline into overloads, restructure code Restructure code and rename operator traits Jun 19, 2024
@adrhill adrhill mentioned this pull request Jun 19, 2024
Closed
@adrhill adrhill merged commit b47e936 into main Jun 19, 2024
5 checks passed
@adrhill adrhill deleted the ah/array-overloads branch June 19, 2024 18:35
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@adrhill @codecov-commenter