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corrections to remove double suffix in _coordsystem.jon #183

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corrections to remove double suffix in _coordsystem.jon #183

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751be63
corrections to remove double suffix in derivatives surface and in _co…
May 11, 2020
b787106
Merge remote-tracking branch 'upstream/master'
Jun 4, 2020
82c36b1
added _desc-T1w to clarify that the pial is derived from the T1 image
Jun 4, 2020
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0 ...01/anat/sub-Talairach_T1w_pial.L.surf.gii → ...1/anat/sub-Talairach_hemi-L_pial.surf.gii
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0 ...01/anat/sub-Talairach_T1w_pial.R.surf.gii → ...1/anat/sub-Talairach_hemi-R_pial.surf.gii
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0 ...b-bp/ses-01/anat/sub-bp_T1w_pial.surf.gii → ...ses-01/anat/sub-bp_desc-T1w_pial.surf.gii
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0 ...b-ca/ses-01/anat/sub-ca_T1w_pial.surf.gii → ...ses-01/anat/sub-ca_desc-T1w_pial.surf.gii
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0 ...b-cc/ses-01/anat/sub-cc_T1w_pial.surf.gii → ...ses-01/anat/sub-cc_desc-T1w_pial.surf.gii
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0 ...b-hl/ses-01/anat/sub-hl_T1w_pial.surf.gii → ...ses-01/anat/sub-hl_desc-T1w_pial.surf.gii
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0 ...b-jc/ses-01/anat/sub-jc_T1w_pial.surf.gii → ...ses-01/anat/sub-jc_desc-T1w_pial.surf.gii
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0 ...b-wc/ses-01/anat/sub-wc_T1w_pial.surf.gii → ...ses-01/anat/sub-wc_desc-T1w_pial.surf.gii
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0 ...b-zt/ses-01/anat/sub-zt_T1w_pial.surf.gii → ...ses-01/anat/sub-zt_desc-T1w_pial.surf.gii
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4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-ACPC_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-bp/ses-01/anat/sub-bp_T1w_pial.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-bp/ses-01/anat/sub-bp_desc-T1w_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"iEEGCoordinateProcessingDescription": "surface_projection_Hermes"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-ACPC_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-ca/ses-01/anat/sub-ca_T1w_pial.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-ca/ses-01/anat/sub-ca_desc-T1w_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"iEEGCoordinateProcessingDescription": "surface_projection_Hermes"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-ACPC_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-cc/ses-01/anat/sub-cc_T1w_pial.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-cc/ses-01/anat/sub-cc_desc-T1w_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"iEEGCoordinateProcessingDescription": "surface_projection_Hermes"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-de/ses-01/ieeg/sub-de_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-fp/ses-01/ieeg/sub-fp_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-gc/ses-01/ieeg/sub-gc_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-hh/ses-01/ieeg/sub-hh_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-ACPC_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-hl/ses-01/anat/sub-hl_T1w_pial.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-hl/ses-01/anat/sub-hl_desc-T1w_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"iEEGCoordinateProcessingDescription": "surface_projection_Hermes"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-ACPC_coordsystem.json
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@@ -1,8 +1,8 @@
{
"IntendedFor": "/derivatives/surfaces/sub-jc/ses-01/anat/sub-jc_T1w_pial.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-jc/ses-01/anat/sub-jc_desc-T1w_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"iEEGCoordinateProcessingDescription": "surface_projection_Hermes"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-jm/ses-01/ieeg/sub-jm_ses-01_space-Talairach_coordsystem.json
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@@ -1,7 +1,7 @@
{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-jt/ses-01/ieeg/sub-jt_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-rh/ses-01/ieeg/sub-rh_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-rr/ses-01/ieeg/sub-rr_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-ug/ses-01/ieeg/sub-ug_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-wc/ses-01/ieeg/sub-wc_ses-01_space-ACPC_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-wc/ses-01/anat/sub-wc_T1w_pial.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-wc/ses-01/anat/sub-wc_desc-T1w_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"iEEGCoordinateProcessingDescription": "surface_projection_Hermes"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-wc/ses-01/ieeg/sub-wc_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-zt/ses-01/ieeg/sub-zt_ses-01_space-ACPC_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-zt/ses-01/anat/sub-zt_T1w_pial.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-zt/ses-01/anat/sub-zt_desc-T1w_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"iEEGCoordinateProcessingDescription": "surface_projection_Hermes"
}
}
4 changes: 2 additions & 2 deletions ieeg_motorMiller2007/sub-zt/ses-01/ieeg/sub-zt_ses-01_space-Talairach_coordsystem.json
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{
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "Talairach",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Talairach space RAS",
"iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth"
}
}
0 ...01/anat/sub-01_ses-01_T1w_pial.R.surf.gii → ...1/anat/sub-01_ses-01_hemi-R_pial.surf.gii
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4 changes: 2 additions & 2 deletions ieeg_visual/sub-01/ses-01/ieeg/sub-01_ses-01_coordsystem.json
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{
"IntendedFor": "/derivatives/surface/sub-01/ses-01/anat/sub-01_ses-01_T1w_pial.R.surf.gii",
"IntendedFor": "/derivatives/surface/sub-01/ses-01/anat/sub-01_ses-01_hemi-R_pial.surf.gii",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin close to the anterior commissure (AC), negative y-axis going more or less through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingDescription": "surface_projection",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth"
}
}
4 changes: 2 additions & 2 deletions ieeg_visual/sub-02/ses-01/ieeg/sub-02_ses-01_coordsystem.json
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{
"IntendedFor": "/derivatives/surface/sub-02/ses-01/anat/sub-02_ses-01_T1w_pial.L.surf.gii",
"IntendedFor": "/sub-02/ses-01/anat/sub-02_ses-01_T1w.nii.gz",
"iEEGCoordinateSystem": "ACPC",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Coordinate system with the origin close to the anterior commissure (AC), negative y-axis going more or less through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right",
"iEEGCoordinateProcessingDescription": "surface_projection",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth"
}
}