Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

add participants.json with Levels as objects #413

Merged
merged 3 commits into from
Nov 3, 2023
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
21 changes: 21 additions & 0 deletions 7t_trt/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
{
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"age_at_first_scan_years": {
"LongName": "age_at_first_scan_years",
"Units": "years"
}
}
34 changes: 34 additions & 0 deletions ds000117/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,34 @@
{
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
},
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"first_ses": {
"LongName": "first session",
"Description": "Indicates which session was the first session for this subject.",
"Levels": {
"meg": {
"Description": "meg was the first session"
},
"mri": {
"Description": "mri was the first session"
}
}
}
}
22 changes: 22 additions & 0 deletions ds008/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
{
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
}
}
21 changes: 21 additions & 0 deletions ds009/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
{
"Age": {
"LongName": "Age",
"Units": "years",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
},
"Gender": {
"LongName": "Gender",
"TermURL": "https://schema.org/gender",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "https://schema.org/Female"
},
"M": {
"Description": "Male",
"TermURL": "https://schema.org/Male"
}
}
}
}
22 changes: 22 additions & 0 deletions ds101/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
{
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
}
}
25 changes: 25 additions & 0 deletions ds102/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,25 @@
{
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"D": {
"Description": "D"
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I have removed "TermURL" here for now. If somebody knows what this means, please feel free to clarify.

},
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
}
}
22 changes: 22 additions & 0 deletions ds108/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
{
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
}
}
22 changes: 22 additions & 0 deletions ds110/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
{
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
}
}
15 changes: 15 additions & 0 deletions ds114/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,15 @@
{
"dominant_hand": {
"LongName": "dominant_hand",
"Levels": {
"left": {
"Description": "left",
"TermURL": "http://purl.bioontology.org/ontology/SNOMEDCT/87683000"
},
"right": {
"Description": "right",
"TermURL": "http://purl.bioontology.org/ontology/SNOMEDCT/46669005"
}
}
}
}
65 changes: 65 additions & 0 deletions ds116/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,65 @@
{
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
},
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
},
"handedness": {
"LongName": "handedness",
"Description": "String value indicating handedness",
"TermURL": "http://purl.bioontology.org/ontology/SNOMEDCT/57427004",
"Levels": {
"L": {
"Description": "Left",
"TermURL": "http://purl.bioontology.org/ontology/SNOMEDCT/87683000"
},
"R": {
"Description": "Right",
"TermURL": "http://purl.bioontology.org/ontology/SNOMEDCT/46669005"
}
}
},
"ethnicity": {
"LongName": "ethnicity",
"TermURL": "http://purl.obolibrary.org/obo/HANCESTRO_0004",
"Levels": {
"Asian": {
"Description": "Asian",
"TermURL": "http://purl.obolibrary.org/obo/HANCESTRO_0008"
},
"Asian/Caucasian": {
"Description": "Asian Caucasian"
},
"Caucasian": {
"Description": "Caucasian",
"TermURL": "http://purl.obolibrary.org/obo/HANCESTRO_0005"
},
"Caucasian/African/NativeSouthAmerican": {
"Description": "Caucasian African NativeSouthAmerican"
},
"Hispanic": {
"Description": "Hispanic",
"TermURL": "http://purl.obolibrary.org/obo/HANCESTRO_0014"
},
"MiddleEastern": {
"Description": "MiddleEastern",
"TermURL": "http://purl.obolibrary.org/obo/HANCESTRO_0015"
}
}
}
}
22 changes: 22 additions & 0 deletions eeg_ds000117/participants.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
{
"age": {
"LongName": "age",
"Units": "year",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000011"
},
"sex": {
"LongName": "sex",
"Description": "String value indicating phenotypical sex.",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0001894",
"Levels": {
"F": {
"Description": "Female",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000383"
},
"M": {
"Description": "Male",
"TermURL": "http://purl.obolibrary.org/obo/PATO_0000384"
}
}
}
}
Loading