Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[ENH] Add links to example datasets for each modality #845

Merged
merged 15 commits into from
Nov 11, 2021
9 changes: 9 additions & 0 deletions src/04-modality-specific-files/02-magnetoencephalography.md
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,15 @@ Please see [Citing BIDS](../01-introduction.md#citing-bids)
on how to appropriately credit this extension when referring to it in the
context of the academic literature.

The following example MEG datasets have been formatted using this specification
and can be used for practical guidance when curating a new dataset.

- [`multimodal MEG and MRI`](https://github.com/bids-standard/bids-examples/tree/master/ds000117)

Further datasets are available from
the [BIDS examples repository](https://github.com/bids-standard/bids-examples).


## MEG recording data

{{ MACROS___make_filename_template(datatypes=["meg"], suffixes=["meg", "markers", "events"]) }}
Expand Down
5 changes: 3 additions & 2 deletions src/04-modality-specific-files/03-electroencephalography.md
Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,11 @@ The following example EEG datasets have been formatted using this specification
and can be used for practical guidance when curating a new dataset.

- Single session per subject: [`eeg_matchingpennies`](https://doi.org/10.17605/OSF.IO/CJ2DR)
Remi-Gau marked this conversation as resolved.
Show resolved Hide resolved
- Multiple sessions per subject: [`eeg_rishikesh`](https://doi.org/10.5281/zenodo.1490922)
- Multiple sessions per subject: [`eeg_rishikesh`](https://github.com/bids-standard/bids-examples/tree/master/eeg_rishikesh)
- Combined with fMRI: [`eeg_rest_fmri`](https://osf.io/94c5t/files/)

Further datasets are available from the [BIDS examples repository](https://github.com/bids-standard/bids-examples).
Further datasets are available from
the [BIDS examples repository](https://github.com/bids-standard/bids-examples#eeg-datasets).

## EEG recording data

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,18 @@ Please see [Citing BIDS](../01-introduction.md#citing-bids)
on how to appropriately credit this extension when referring to it in the
context of the academic literature.

The following example iEEG datasets have been formatted using this specification
and can be used for practical guidance when curating a new dataset.

- iEEG:
[`ieeg visual`](https://github.com/bids-standard/bids-examples/tree/master/ieeg_visual)
- multimodal iEEG and functional MRI:
[`ieeg visual multimodal`](https://github.com/bids-standard/bids-examples/tree/master/ieeg_visual_multimodal)

Further datasets are available from
the [BIDS examples repository](https://github.com/bids-standard/bids-examples#ieeg-datasets).


## iEEG recording data

{{ MACROS___make_filename_template(datatypes=["ieeg"], suffixes=["ieeg", "events"]) }}
Expand Down
5 changes: 5 additions & 0 deletions src/04-modality-specific-files/08-genetic-descriptor.md
Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,11 @@ A genetic descriptor links a BIDS dataset to associated genetic data,
potentially in a separate repository,
with details of where to find the genetic data and the type of data available.

The following example dataset with genetics data have been formatted using this specification
and can be used for practical guidance when curating a new dataset.

- [`UK biobank`](https://github.com/bids-standard/bids-examples/tree/master/genetics_ukbb)

## Dataset Description

Genetic descriptors are encoded as an additional, OPTIONAL entry in the
Expand Down