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Imported react-mutation-mapper repo #2957

Merged
merged 54 commits into from
Jan 3, 2020
Merged

Imported react-mutation-mapper repo #2957

merged 54 commits into from
Jan 3, 2020

Commits on Jan 3, 2020

  1. Init react-mutation-mapper

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  2. Init lib & add generic LollipopPlot component

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  3. exported Domain, Lollipop, and Sequence specs

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  4. Using cbioportal-frontend-commons instead of cbioportal-frontend-core

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  5. Updated data store interface

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  6. Fix tooltip position calculations being affected by container

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  7. Added LollipopMutationPlot component

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  8. Added annotation tracks within the LollipopMutationPlot component

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  9. Bump handlebars from 4.1.1 to 4.1.2

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  10. Moved over MutationAnnotator from cbioportal-frontend codebase

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  11. Use https for cancerhotspots links

    @inodb @onursumer
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  12. updated GenomeNexus and OncoKB APIs

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  13. Added options to customize lollipop plot controls

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  14. Critical fix for MutationAnnotator

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  15. Updated Genome Nexus API

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  16. Bump lodash from 4.17.11 to 4.17.13

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  17. Bump lodash.template from 4.4.0 to 4.5.0

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  18. Added basic Mutation Mapper component

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  19. Added support for custom mutation count

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  20. Made lollipop plot horizontally responsive

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  21. Added filter reset panel

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  22. Added a default pubmed cache

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  23. Using custom mutation count function when deciding the mutation color

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  24. Using partial mutation instead of mutation for certain props

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  25. Using partial mutation instead of mutation for more props

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  26. Resetting expander on data and selection filters change

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  27. Do not hide expander column

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  28. Removed generated API clients

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  29. Added oncokbUrl prop for MutationMapper

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  30. Removed an incorrect reference to a redundant style

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  31. Use oncokb-styles package from npm; Update OncoKB Card styles (cBioPo… 

    …rtal#63)
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  32. made the table rows more compact

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  33. Updated cbioportal-frontend-commons to 0.0.18

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  34. Removed class name and style from TranscriptDropdown

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  35. Added watch options to rollup config

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  36. update cbioportal-frontend-commons to 0.0.22 

    Signed-off-by: Hongxin Zhang <[email protected]>
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  37. Point oncokb instance to a legacy instance

    @zhx828 @onursumer
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  38. Release 0.3.0

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  39. Made tests compatible with Jest

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  40. added node workflow

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  41. run Node CI on pull requests as well

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  42. publish.yml github action file

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  43. Moved all components under component directory

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  44. publish.yml release syntax fix

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  45. Centering filter reset panel within the lollipop plots container

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  46. Made the transcript summary URL configurable for the gene summary panel

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  47. Fix the broken tooltip for the no gnomad data case

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  48. Added explicit return statements for data fetcher methods

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  49. Added an option to enable special click behavior for the protein impa… 

    …ct type selector
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  50. Update packages to support oncokb-auth

    @zhx828 @onursumer
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  51. Support OncoKB Level 2

    @zhx828 @onursumer
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  52. Aligned badge selector content per column

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  53. Updated version to 0.3.6

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  54. updated build dependencies, scripts, and docs 

    Signed-off-by: Onur Sumer <[email protected]>
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