Fix error while fetching referenceGenomeSize #2991
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
alisman
reviewed
Jan 16, 2020
| @@ -92,7 +92,7 @@ export function getChmInfo(genomeBuild:string) { | |||
| if (!referenceGenome || referenceGenome === "") { | |||
| referenceGenome = DEFAULT_GENOME_BUILD; | |||
| } | |||
| const genomeSize = referenceGenomeSizes[genomeBuild]; | |||
| const genomeSize = referenceGenomeSizes[referenceGenome]; | |||
There was a problem hiding this comment.
do we have a sense why this working for other patients? seems like we were using the key instead of the value
There was a problem hiding this comment.
for other patients ncbiBuild of first mutation is in one of referenceGenomeSizes keys
There was a problem hiding this comment.
hi @alisman , @kalletlak , my mistake, should be referenceGenome. Thanks!
khzhu
approved these changes
Jan 16, 2020
alisman
approved these changes
Jan 16, 2020
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Fix cBioPortal/cbioportal#7008