v1.0.0

🖋 New Studies

• Added data consisting of 2,472 samples from 5 studies:
  • Bladder Cancer (MSK, Cell Reports 2022) 1659 samples
  • Gastrointestinal Stromal Tumor (MSK, NPJ Precis Oncol 2023) 499 samples
  • Appendiceal Cancer (MSK, J Clin Oncol 2022) 273 samples
  • Colorectal Cancer (MSK, Cancer Discovery 2022) 22 samples
  • Nerve Sheath Tumors (Johns Hopkins, Sci Data 2020) 19 samples [First GRCh38 Study]

📇 Data Improvement

• Added TERT promoter mutation status to Melanomas (TCGA, Cell 2015), Papillary Thyroid Carcinoma (TCGA, Cell 2014) TCGA studies. @rmadupuri
• Added H&E image lines and WGS data to Ovarian Cancer - MSK SPECTRUM (MSK, Nature 2022) @inodb @rmadupuri
• Added WXS data to Rectal Cancer (MSK, Nature Medicine 2022) @sbabyanusha

📝 Updates to Existing Studies

• brca_metabric: Updated Expression data filenames [#1789] @rmadupuri
• lung_nci_2022: Added gene panel matrix file [#1744] @sbabyanusha
• skcm_tcga_pub_2015: Updated description to meta mutation file [#1751] @rmadupuri
• brca_tcga_pan_can_atlas_2018: Fix the typo in treatment data file [#1757] @rmadupuri
• ucec_ccr_cfdna_msk_2022: Re-annotated MAF [#1782] @sbabyanusha
• Added PMID's and citations to missing studies.[#1750] @sbabyanusha
• Updated the study ID nst_nfosi_2022 to nst_nfosi_ntap [#1762] @rmadupuri