⚗️ Added experimental data of the Bestagon paper #33
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Bumps [libs/parallel-hashmap](https://github.com/greg7mdp/parallel-hashmap) from `7883cb6` to `d2bed96`. - [Release notes](https://github.com/greg7mdp/parallel-hashmap/releases) - [Commits](greg7mdp/parallel-hashmap@7883cb6...d2bed96) --- updated-dependencies: - dependency-name: libs/parallel-hashmap dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* ⬆️ Bump libs/Catch2 from `6783411` to `1f881ab` (#27) Bumps [libs/Catch2](https://github.com/catchorg/Catch2) from `6783411` to `1f881ab`. - [Release notes](https://github.com/catchorg/Catch2/releases) - [Commits](catchorg/Catch2@6783411...1f881ab) --- updated-dependencies: - dependency-name: libs/Catch2 dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * ⬆️ Bump libs/parallel-hashmap from `7883cb6` to `d2bed96` (#33) Bumps [libs/parallel-hashmap](https://github.com/greg7mdp/parallel-hashmap) from `7883cb6` to `d2bed96`. - [Release notes](https://github.com/greg7mdp/parallel-hashmap/releases) - [Commits](greg7mdp/parallel-hashmap@7883cb6...d2bed96) --- updated-dependencies: - dependency-name: libs/parallel-hashmap dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * 🎨 return value of ``sidb_nm_position`` changed from meter to nanometer for consistency. * 🎨 renaming. --------- Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Drewniok <[email protected]>
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May 7, 2023
* ✨ header for temperature simulation * ✨ header for temperature simulation * ✅ occupation function with tests * 🚧 "critical temperature function" is implemented. Test also added. * 🚧 CT of "bestagon gates" can be simulated correctly * ✅ tests updated * ✅ tests updated * ✅ tests updated * 🎨 map replaced by vector * 📝 docu for new functions * 📝 docu for new functions * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🚀 * ⬆️ submodules upgraded * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 small cahnges * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 replaced std::rand(), caused problem at temperature implementation * 🎨 small changes here and there * 🎨 reformat code * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 renaming function * ✨ flag added to decide between gate and random layout * ✨ flag added to decide between gate and random layout * ✨ flag added to decide between gate and random layout * ✨ min_energy added in occupation_probability.hpp * 🎨 Reformatted and cleaned up code * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 Slight revision for consistency * 🎨 renaming * ⬆️ Bump libs/Catch2 from `50bf00e` to `9a2a4ea` (#182) * 🎨 reformat code * redefinition of sidb_nm_position (#186) * ⬆️ Bump libs/Catch2 from `6783411` to `1f881ab` (#27) Bumps [libs/Catch2](https://github.com/catchorg/Catch2) from `6783411` to `1f881ab`. - [Release notes](https://github.com/catchorg/Catch2/releases) - [Commits](catchorg/Catch2@6783411...1f881ab) --- updated-dependencies: - dependency-name: libs/Catch2 dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * ⬆️ Bump libs/parallel-hashmap from `7883cb6` to `d2bed96` (#33) Bumps [libs/parallel-hashmap](https://github.com/greg7mdp/parallel-hashmap) from `7883cb6` to `d2bed96`. - [Release notes](https://github.com/greg7mdp/parallel-hashmap/releases) - [Commits](greg7mdp/parallel-hashmap@7883cb6...d2bed96) --- updated-dependencies: - dependency-name: libs/parallel-hashmap dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * 🎨 return value of ``sidb_nm_position`` changed from meter to nanometer for consistency. * 🎨 renaming. --------- Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Drewniok <[email protected]> * 👷 Use the GitHub token of the checked-out repo instead of the own for the `add-and-commit` action after clang-format has been run * 🎨 Changed the unit of the lambda-tf physical parameter from meter to nanometer (#188) * 🎨 Unit of `lambda_tf` is changed from meter to nanometer. * 🎨 `epsilon_r` is unit-less. * ✨ Added a function to round a number to `n` decimal places (#189) * ✨ small function to round numbers to ``n`` decimal places. * ✅ test added. * 🎨 implemented Marcel's suggestions. * 🎨 make use of new function in ``energy_distribution``. * ✨ Added an SiDB simulation file writer (#176) * ✨ Added a new unified return type for SiDB simulation * ✨ Added a file writer for SQD simulation runs parsable by SiQAD * 📝 Added and fixed docstrings * 📝 Added RST documentation * 📝 Removed superfluous newlines * 🎨 Incorporated clang-tidy's recommendations * 🎨 Rewrote `any_to_string` to be more performant and extensible * 🐛 Replaced the usage of the custom charge to string function with the one provided by `sidb_charge_state.hpp` * ✅ Added a test case for positive SiDBs * ✅ Added test cases for `any_to_string` * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🐛 Added `inline` to `any_to_string` in order to avoid ODR problems * ✅ Fixed the test case * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 👽 Convert nm to Angstrom * 👽 Round distances and energy values to 6 decimal points * ✅ Added additional tests to cover more lines * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> --------- Signed-off-by: ClangFormat <[email protected]> Co-authored-by: ClangFormat <[email protected]> * 🎨 larger architectural changes. * 🎨 reformat code and documentation. * 🎨 small changes in exhaustive_ground_state_simulation.hpp due to unit changes from ``main`` branch. * 📝 added docu. * ⬆️ Bump ZedThree/clang-tidy-review from 0.12.2 to 0.13.0 (#193) * ⬆️ Bump libs/Catch2 from `9a2a4ea` to `10596b2` (#191) Bumps [libs/Catch2](https://github.com/catchorg/Catch2) from `9a2a4ea` to `10596b2`. - [Release notes](https://github.com/catchorg/Catch2/releases) - [Commits](catchorg/Catch2@9a2a4ea...10596b2) --- updated-dependencies: - dependency-name: libs/Catch2 dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * ⬆️ Bump libs/parallel-hashmap from `d2bed96` to `7807157` (#192) Bumps [libs/parallel-hashmap](https://github.com/greg7mdp/parallel-hashmap) from `d2bed96` to `7807157`. - [Release notes](https://github.com/greg7mdp/parallel-hashmap/releases) - [Commits](greg7mdp/parallel-hashmap@d2bed96...7807157) --- updated-dependencies: - dependency-name: libs/parallel-hashmap dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * ✅ Ensured a reproducible SiDB order for test reproducibility (#194) * ✅ Ensured a reproducible SiDB order for test reproducibility * 💚 Ordered surfaces as well --------- Co-authored-by: Jan Drewniok <[email protected]> * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * ⬆️ Bump DoozyX/clang-format-lint-action from 0.15 to 0.16 (#196) Bumps [DoozyX/clang-format-lint-action](https://github.com/DoozyX/clang-format-lint-action) from 0.15 to 0.16. - [Release notes](https://github.com/DoozyX/clang-format-lint-action/releases) - [Commits](DoozyX/clang-format-lint-action@v0.15...v0.16) --- updated-dependencies: - dependency-name: DoozyX/clang-format-lint-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * 🎨 changes after review. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 changes after review. * 🎨 use data type for energy distribution. * 🎨 additional ``else`` to try to fix windows build issue. * ✨ Make ClangFormat aware of different line ending types and enforce `LF` (#177) * 🎨 Added a flag to the ClangFormat config to enforce LF line endings (as of version 16) * 🎨 Re-applied ClangFormat to the project * ⬆️ Switched to ClangFormat 16 * 📝 add links for RST. * 📝 add links for RST. * 📝 add named anchor. * 📝 use ``-`` instead of ``_``. * 🐛 add missing ``$`` in docstring. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 copy enum class to try to solve window build issue. * 🎨 tiny change in docu. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🔥 remove file from git. * ✅ add additional test. * 🐛 add ``recompute_energy`` and test which failed before. * 🎨 change to scoped enumerator. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 use enum struct. * 🔥 remove ``enum class``due to windows CI issue. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 replace reference. * ✨ code to generate unique random layouts. * ✨ Temperature-aware simulation can be conducted with ``exgs`` or ``quicksim``. All simulation engines use ``sidb_simulation_result`` now to collect results. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 rename struct member. * 🎨 activate automatic state count detection. * ⬆️ Bump libs/parallel-hashmap from `7807157` to `9f09034` (#199) * 🎨 Ensured SiQAD compatibility of SiDB simulation result writer (#197) Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * 🎨 fix ``state count`` to three. Two is not supported by SiQAD yet. * 🎨 reformat code. --------- Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Marcel Walter <[email protected]> * 🎨 update after review (main change: replace stats_pointer as input for simulators). * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 introduce impl_class for quickexact. * 🎨 remove ``const``keyword. * 🎨 add ``const``keyword. * 🎨 split in several smaller functions. * 🎨 rename some functions. * 📝 add docu. * ✨ automatic base number detection can be turned ``on`` and ``off``. * 📝 add more documentation. * 🔥 remove files to shift it to separate PR. * 🎨 change order of ``const``keyword and type. * 📝 add RST. * 📝 add documentation. * 💚 add ``const`` keyword. * 🎨 smaller changes to try to fix test issue. * ✅ small change to avoid windows issue. * 📝 add documentation. --------- Signed-off-by: ClangFormat <[email protected]> Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: Drewniok <[email protected]> Co-authored-by: ClangFormat <[email protected]> Co-authored-by: Marcel Walter <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Drewniok
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Sep 1, 2023
* ✨ detect DBs that may be positively charged and simulate them separately. * 🎨 renaming * ✨ simulation works and all tests complete successfully. * ⬆️ Bump libs/parallel-hashmap from `7883cb6` to `d2bed96` (#33) Bumps [libs/parallel-hashmap](https://github.com/greg7mdp/parallel-hashmap) from `7883cb6` to `d2bed96`. - [Release notes](https://github.com/greg7mdp/parallel-hashmap/releases) - [Commits](greg7mdp/parallel-hashmap@7883cb6...d2bed96) --- updated-dependencies: - dependency-name: libs/parallel-hashmap dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * 🎨 delete if-statement. * 🎨 reformat code * 🎨 reformat code * 🎨 reformat code * 🎨 larger architectural changes. * 🎨 reformat code and documentation. * 🎨 small changes in exhaustive_ground_state_simulation.hpp due to unit changes from ``main`` branch. * 📝 added docu. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 changes after review. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 changes after review. * 🎨 use data type for energy distribution. * 🎨 additional ``else`` to try to fix windows build issue. * 📝 add links for RST. * 📝 add links for RST. * 📝 add named anchor. * 📝 use ``-`` instead of ``_``. * 🐛 add missing ``$`` in docstring. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 copy enum class to try to solve window build issue. * 🎨 tiny change in docu. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🔥 remove file from git. * ✅ add additional test. * 🐛 add ``recompute_energy`` and test which failed before. * 🎨 change to scoped enumerator. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 use enum struct. * 🔥 remove ``enum class``due to windows CI issue. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 replace reference. * ✨ code to generate unique random layouts. * ✨ Temperature-aware simulation can be conducted with ``exgs`` or ``quicksim``. All simulation engines use ``sidb_simulation_result`` now to collect results. * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 rename struct member. * 🎨 activate automatic state count detection. * 🎨 update after review (main change: replace stats_pointer as input for simulators). * 🎨 ClangFormat changes Signed-off-by: ClangFormat <[email protected]> * 🎨 introduce impl_class for quickexact. * 🎨 remove ``const``keyword. * 🎨 add ``const``keyword. * 🎨 split in several smaller functions. * 🎨 rename some functions. * 📝 add docu. * ✨ automatic base number detection can be turned ``on`` and ``off``. * 📝 add more documentation. * 🔥 remove files to shift it to separate PR. * 🎨 change order of ``const``keyword and type. * 📝 add RST. * 📝 add documentation. * 💚 add ``const`` keyword. * 🎨 smaller changes to try to fix test issue. * ✅ small change to avoid windows issue. * 📝 add documentation. * 📝 add documentation. * 🔀 merge with temperature-branch. * 🎨 small changes here and there (documentation, remove header, etc.) * 🔥 remove additional function. * 🎨 reformat code. * 🎨 add equal sign. * 🎨 clang-tidy suggestions. * 🎨 fix a few typo. * 🎨 renaming and put ``stats`` as last. * 🎨 implement Marcel's first comments. * 🎨 add enum classes to make use of functions friendlier. * 🎨 add enum class for both exhaustive simulators. * 🔥 remove ``this``. * 🎨 only one enum class in enum_class_exhaustive_algorithm.hpp * 🎨 simulation_result is added as an attribute. * 🎨 replace keyword ``set`` by ``assign`` to be consistent. * 🎨 take order of member function from the ``pyml`` branch. * ✨ add the equality and inequality operator. * ✅ add test for the equality and inequality operator. * 🎨 use ``sidb_surface`` to store defects. * 🎨 add test. * 🎨 reformat code. * 🐛 correct wrong unit test. * 🎨 change unit test. * ✨ added avoidance distance simulation. * ✨ bounding box for siqad layout. * ✨ function to determine the defect influence distance. * 🎨 more defect places added. * 🎨 sort sidbs in the charge distribution surface at the initialization. * 🎨 add parameter struct. * ✅ add tests for the defect_influence_distance function. * 🎨 add new type. * 🐛 add WithinAbs in unit test. * 🐛 delete Check for negative indices. * 🐛 small bug fix. * 🐛 add previously deleted cells to layout. * ✨ Multithreading for defect avoidance simulation. * 🎨 add lambda caption. * 🔀 merge ``main``. Unit library is new. * 🎨 adapting code for unit library. * 🎨 adapt sidb defects to unit library. * 🎨 adapt sidb defects to unit library. * 🎨 implement unit library to code. * 🎨 implement unit library to code. * 🎨 integrate unit library. * 🎨 all unit test run successfully. * 🎨 small changes, trying to improve performance. * ➖ Remove ``unit`` library due to increasing simulation runtimes. * 🎨 implement Marcel's suggestions. * ✅ add a few more tests. * ✅ add a few more tests. * ✅ remove ``unit library``. * 📝 more documentation (add physical unit information). * 📝 add docu. * ✅ All tests run successfully. * 🐛 add time_to_solution unit test again, issue caused by github merge conflict. * 🎨 remove redundant unit test case. * 🎨 change ``CHECK`` for defect position due to symmetry. * 🐛 wrong cell where ``get_local_potential`` is applied. * 🎨 reformat code. * ✅ add unit test. * 🎨 Structural improvements and consistency fixes for the code of the QuickExact algorithm * 🎨 rename function. * 🔀 merge ``main``. * ✅ add more unit tests. * ✅ add more unit tests to cover different physical parameters. * 🎨 delete redundant line of code. * ✨ function to determine whether positive charges can occur in a given SiDB layout for given physical parameters. * 🎨 add pre-mature break. * ✨ finish function to detect if SiDBs can be positively charged. * 🎨 more generic description. * 🎨 code cleaning. * 🎨 code cleanup. * 🎨 code cleanup. * ✅ correct bug in test. * 🎨 if statement over several statements. * 🐛 Wrong cell whose local potential is accessed. * 🐛 remove runtime test due to issues in debug mode. * 🎨 delete cout. * 🐛 make sure that defects, if any, are included in the simulation results layouts. * ✅ add test to check if defects are included in the simulation result layout. * ✅ Gray code iterator to iterate from a start integer to an end integer in Gray code order. * 📝 add docu. * 🎨 add postfix increment operator. * 🎨 remove ambiguous operators. * 🎨 use ``QuickExact`` for temperature simulation. * 🎨 implement suggestions and add docu. * 🎨 implement suggestions. * 🎨 use pair for additional_scanning_area. * 🎨 remove unnecessary ``if`` statement and add tests. * 🎨 add atomic header. * 🎨 remove atomic again. * 🎨 wrong data type. * 📝 add more docu. * ✅ add test. * ✅ implement ``clang-tidy``. * ✅ add more test. * 🎨 implement ``clang-tidy`` suggestions. --------- Signed-off-by: dependabot[bot] <[email protected]> Signed-off-by: ClangFormat <[email protected]> Co-authored-by: Drewniok <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: ClangFormat <[email protected]> Co-authored-by: Marcel Walter <[email protected]>
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This PR adds the experimental data and layout files of the paper Hexagons are the Bestagons: Design Automation for Silicon Dangling Bond Logic by Marcel Walter, Samuel Sze Hang Ng, Konrad Walus, and Robert Wille in Design Automation Conference 2022.