Skip to content

chore: HuBMAP v7

chore: HuBMAP v7 #6381

Triggered via pull request November 5, 2024 19:36
Status Success
Total duration 20m 4s
Artifacts 5

rdev-update-for-pr.yml

on: pull_request
get_previous_image_digests
1m 5s
get_previous_image_digests
Matrix: build_images / build_images
seed-wmg-cellguide-rdev
3m 28s
seed-wmg-cellguide-rdev
summarize
0s
summarize
rdev-tests  /  seed-database-e2e-tests
16s
rdev-tests / seed-database-e2e-tests
rdev-tests  /  functional-test
7m 12s
rdev-tests / functional-test
delete-previous-images
19s
delete-previous-images
Matrix: rdev-tests / run-e2e-tests
rdev-tests  /  e2e-logged-in-test
4m 9s
rdev-tests / e2e-logged-in-test
rdev-tests  /  merge-playwright-reports
1m 0s
rdev-tests / merge-playwright-reports
rdev-tests  /  e2e-test
4s
rdev-tests / e2e-test
Fit to window
Zoom out
Zoom in

Annotations

4 errors, 34 warnings, and 6 notices
[chromium] › tests/features/collection/revision.test.ts:329:9 › Collection Revision @loggedIn › reorder datasets › saves reorder: frontend/tests/features/collection/revision.test.ts#L565
1) [chromium] › tests/features/collection/revision.test.ts:329:9 › Collection Revision @loggedin › reorder datasets › saves reorder Error: tryUntil() failed - Maxed out timeout of 60000ms: No available collection 563 | } 564 | > 565 | throw new Error("No available collection"); | ^ 566 | } 567 | }, 568 | { page, timeoutMs: WAIT_FOR_MIN_USABLE_COLLECTION_TIMEOUT_MS } at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:565:15) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at startRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:537:3) at startReorderableRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:772:3) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:331:7
[chromium] › tests/features/collection/revision.test.ts:422:9 › Collection Revision @loggedIn › reorder datasets › move first dataset to last position: frontend/tests/features/collection/revision.test.ts#L565
2) [chromium] › tests/features/collection/revision.test.ts:422:9 › Collection Revision @loggedin › reorder datasets › move first dataset to last position Error: tryUntil() failed - Maxed out timeout of 60000ms: No available collection 563 | } 564 | > 565 | throw new Error("No available collection"); | ^ 566 | } 567 | }, 568 | { page, timeoutMs: WAIT_FOR_MIN_USABLE_COLLECTION_TIMEOUT_MS } at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:565:15) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at startRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:537:3) at startReorderableRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:772:3) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:424:7
[chromium] › tests/features/cellGuide/cellGuide.test.ts:563:11 › Cell Guide › CellGuide Card › Source Data Table › Source data table is displayed with columns and at least one entry displayed: frontend/tests/features/cellGuide/cellGuide.test.ts#L592
1) [chromium] › tests/features/cellGuide/cellGuide.test.ts:563:11 › Cell Guide › CellGuide Card › Source Data Table › Source data table is displayed with columns and at least one entry displayed Error: tryUntil() failed - Maxed out timeout of 180000ms: tryUntil() failed - Maxed out retries of 50: expect(received).toEqual(expected) // deep equality - Expected - 7 + Received + 1 - Array [ - "Collection", - "Publication", - "Tissue", - "Disease", - "Organism", - ] + Array [] 590 | ); 591 | > 592 | expect(columnHeaders).toEqual([ | ^ 593 | "Collection", 594 | "Publication", 595 | "Tissue", at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/cellGuide/cellGuide.test.ts:592:39) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/cellGuide/cellGuide.test.ts:579:13) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/cellGuide/cellGuide.test.ts:570:9
[chromium] › tests/features/cellGuide/cellGuide.test.ts:563:11 › Cell Guide › CellGuide Card › Source Data Table › Source data table is displayed with columns and at least one entry displayed: frontend/tests/features/cellGuide/cellGuide.test.ts#L592
1) [chromium] › tests/features/cellGuide/cellGuide.test.ts:563:11 › Cell Guide › CellGuide Card › Source Data Table › Source data table is displayed with columns and at least one entry displayed Retry #1 ─────────────────────────────────────────────────────────────────────────────────────── Error: tryUntil() failed - Maxed out timeout of 180000ms: tryUntil() failed - Maxed out retries of 50: expect(received).toEqual(expected) // deep equality - Expected - 7 + Received + 1 - Array [ - "Collection", - "Publication", - "Tissue", - "Disease", - "Organism", - ] + Array [] 590 | ); 591 | > 592 | expect(columnHeaders).toEqual([ | ^ 593 | "Collection", 594 | "Publication", 595 | "Tissue", at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/cellGuide/cellGuide.test.ts:592:39) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/cellGuide/cellGuide.test.ts:579:13) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/cellGuide/cellGuide.test.ts:570:9
build_images / build_images (upload_failures)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build_images / build_images (upload_failures)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
build_images / build_images (dataset_submissions)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build_images / build_images (dataset_submissions)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
build_images / build_images (upload_success)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build_images / build_images (upload_success)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
build_images / build_images (wmg_processing)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build_images / build_images (wmg_processing)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
build_images / build_images (processing)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build_images / build_images (processing)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
build_images / build_images (cellguide_pipeline)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build_images / build_images (cellguide_pipeline)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
seed-wmg-cellguide-rdev
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
seed-wmg-cellguide-rdev
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
build_images / build_images (frontend)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build_images / build_images (frontend)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
deploy-rdev
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
deploy-rdev
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / seed-database-e2e-tests
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
rdev-tests / seed-database-e2e-tests
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / e2e-tests chromium 3 of 5
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / e2e-tests chromium 3 of 5
No files were found with the provided path: /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/playwright-report. No artifacts will be uploaded.
rdev-tests / e2e-tests chromium 2 of 5
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / e2e-tests chromium 2 of 5
No files were found with the provided path: /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/playwright-report. No artifacts will be uploaded.
rdev-tests / e2e-logged-in-test
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / e2e-tests chromium 4 of 5
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / e2e-tests chromium 4 of 5
No files were found with the provided path: /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/playwright-report. No artifacts will be uploaded.
rdev-tests / functional-test
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
rdev-tests / functional-test
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / e2e-tests chromium 5 of 5
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / e2e-tests chromium 5 of 5
No files were found with the provided path: /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/playwright-report. No artifacts will be uploaded.
rdev-tests / e2e-tests chromium 1 of 5
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
rdev-tests / merge-playwright-reports
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/download-artifact@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "all-blob-reports", "allure-results", "html-report--attempt-1", "playwright-report chromium 1 of 5". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
🎭 Playwright Run Summary
1 skipped 59 passed (5.2s)
🎭 Playwright Run Summary
1 skipped 59 passed (1.4m)
🎭 Playwright Run Summary
2 flaky [chromium] › tests/features/collection/revision.test.ts:329:9 › Collection Revision @loggedin › reorder datasets › saves reorder [chromium] › tests/features/collection/revision.test.ts:422:9 › Collection Revision @loggedin › reorder datasets › move first dataset to last position 15 passed (2.5m)
🎭 Playwright Run Summary
3 skipped 56 passed (3.4m)
🎭 Playwright Run Summary
4 skipped 55 passed (5.1m)
🎭 Playwright Run Summary
1 flaky [chromium] › tests/features/cellGuide/cellGuide.test.ts:563:11 › Cell Guide › CellGuide Card › Source Data Table › Source data table is displayed with columns and at least one entry displayed 3 skipped 56 passed (7.5m)

Artifacts

Produced during runtime
Name Size
all-blob-reports Expired
58 MB
allure-results
61.6 MB
html-report--attempt-1
61.2 MB
logged-in-test-results
2.08 MB
playwright-report chromium 1 of 5
59.5 MB