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...2-2022.2-DADA2-SILVA138.1-PR2_4.14.0/02-utility-scripts/package-code-for-external-repo.sh
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#!/bin/bash -i | ||
mkdir -p code-export/02-EUKs/ code-export/02-PROKs | ||
cp -r *cfg runscripts scripts code-export/ | ||
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#scripts | ||
cp -r 02-PROKs/*tsv 02-PROKs/*txt 02-PROKs/scripts/ code-export/02-PROKs | ||
cp -r 02-EUKs/*tsv 02-EUKs/*txt 02-EUKs/scripts/ code-export/02-EUKs | ||
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echo "This directory contains scripts from a custom pipeline for analyzing amplicons from the 515Y/926R primers (https://github.com/jcmcnch/eASV-pipeline-for-515Y-926R). The configuration file included here specifies parameters that the user chose during the analysis." > code-export/README.md |
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