HuBMAP

My first Kaggle submission.

1,090th place.

This project applies FastAI.jl's image segmentation to HuBMAP + HPA - Hacking the Human Body.

This code base is using the Julia Language and DrWatson to make a reproducible scientific project named

HuBMAP

To (locally) reproduce this project, do the following:

0. Download this code base. Notice that raw data are typically not included in the git-history and may need to be downloaded independently.
1. Open a Julia console and do:

   julia> using Pkg
   julia> Pkg.add("DrWatson") # install globally, for using `quickactivate`
   julia> Pkg.activate("path/to/this/project")
   julia> Pkg.instantiate()
   

This will install all necessary packages for you to be able to run the scripts and everything should work out of the box, including correctly finding local paths.