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Initial release of lava-dnf v0.1.0 #8

Merged
merged 121 commits into from
Nov 29, 2021
Merged

Initial release of lava-dnf v0.1.0 #8

merged 121 commits into from
Nov 29, 2021

Commits on Oct 30, 2021

  1. Removed placeholder file

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  2. Removed 'lib' from gitignore 

    Signed-off-by: Mathis Richter <[email protected]>
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  3. Added Population Process and shape validation 

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  4. Added Population SubProcessModel 

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  5. Make unit test for Population ProcessModel ports more explicit 

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Commits on Nov 2, 2021

  1. Unit test that executes a Population 

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Commits on Nov 3, 2021

  1. Modified Population ProcessModel unit test to use get_src_ports/get_d… 

    …st_ports

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  2. Added convenience function num_neurons() 

    Signed-off-by: Mathis Richter <[email protected]>
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  3. Added first version of connect() function 

    Signed-off-by: Mathis Richter <[email protected]>
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  4. Added missing __init__ file 

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Commits on Nov 4, 2021

  1. Added num_dims function 

    Signed-off-by: Mathis Richter <[email protected]>
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  2. Added configuration functionality to operations 

    Signed-off-by: Mathis Richter <[email protected]>
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  3. Added basic configuration of operations in connect() 

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  4. Added additional top-level lava directory and moved lib inside 

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  5. Refactored connect unit tests 

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  6. Added check for multiple operations that change shape (not yet implem… 

    …ented)

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  7. Weights are computed for all operations 

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  8. Fixed linter error 

    Signed-off-by: Mathis Richter <[email protected]>
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  9. Unit testing only against the public API of connect 

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  10. Doc strings for operations module 

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  11. Added exception for misconfigured operations 

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  12. Refactored validation of operations using exceptions rather than bool… 

    …ean returns

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  13. Added Weights operation 

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  14. Unit test for computing weights now covers shapes of 0d-3d 

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Commits on Nov 6, 2021

  1. Major rewrite of operations; now supporting multiple operations that … 

    …change shape.

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Commits on Nov 7, 2021

  1. Added ReduceDims Operation 

    Signed-off-by: Mathis Richter <[email protected]>
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  2. Removed redundant unit test for connect function 

    Signed-off-by: Mathis Richter <[email protected]>
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  3. Added AbstractExpandDimsOperation 

    Signed-off-by: Mathis Richter <[email protected]>
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Commits on Nov 8, 2021

  1. Added ExpandDims Operation 

    Signed-off-by: Mathis Richter <[email protected]>
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  2. Refactored projection function to simplify interface 

    Signed-off-by: Mathis Richter <[email protected]>
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  3. Added Reorder Operation (wip, some redesign required) 

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Commits on Nov 10, 2021

  1. Rough draft of inputs module 

    Signed-off-by: Mathis Richter <[email protected]>
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  2. Refactored operations, extracting the handling of shapes 

    Signed-off-by: Mathis Richter <[email protected]>
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  3. Added acceptance tests in tests/acceptance; moved unit tests to tests… 

    …/unit

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  4. Moved operation enums into separate module 

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Commits on Nov 11, 2021

  1. Minor changes to docstrings 

    Signed-off-by: Mathis Richter <[email protected]>
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  2. Added additional top-level 'src' directory and 'lava' directory under… 

    … 'tests'

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  3. GaussInputPattern + SpikeInputGenerator + BiasInputGenerator and draf… 

    …t Source Processes
    Ghassen Karray committed Nov 11, 2021
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  4. updating .gitignore

    Ghassen Karray committed Nov 11, 2021
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  5. Cosmetics on imports 

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  6. Added is_odd() helper function 

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  7. Added BorderType enum 

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  8. Fixed docstrings 

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  9. Added rudimentary Kernel class to support development of Convolution … 

    …operation

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  10. Added Convolution operation 

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Commits on Nov 12, 2021

  1. Merge remote-tracking branch 'origin/porting_core' into inputs 

    # Conflicts:
#	src/lava/lib/dnf/inputs/__init__.py
#	src/lava/lib/dnf/inputs/bias_source/__init__.py
#	src/lava/lib/dnf/inputs/bias_source/models.py
#	src/lava/lib/dnf/inputs/bias_source/process.py
#	src/lava/lib/dnf/inputs/inputs.py
#	src/lava/lib/dnf/inputs/spike_source/__init__.py
#	src/lava/lib/dnf/inputs/spike_source/models.py
#	src/lava/lib/dnf/inputs/spike_source/process.py
#	tests/lava/lib/dnf/unit/inputs/__init__.py
#	tests/lava/lib/dnf/unit/inputs/bias_source/__init__.py
#	tests/lava/lib/dnf/unit/inputs/bias_source/test_models.py
#	tests/lava/lib/dnf/unit/inputs/bias_source/test_process.py
#	tests/lava/lib/dnf/unit/inputs/spike_source/__init__.py
#	tests/lava/lib/dnf/unit/inputs/spike_source/test_models.py
#	tests/lava/lib/dnf/unit/inputs/spike_source/test_process.py
#	tests/lava/lib/dnf/unit/inputs/test_inputs.py
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  2. Merge branch 'main' of https://github.com/mathisrichter/lava-dnf into… 

    … porting_core

� Conflicts:
�	src/lava/lib/dnf/README.md
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Commits on Nov 13, 2021

  1. Fixed linter warnings 

    Signed-off-by: Mathis Richter <[email protected]>
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Commits on Nov 14, 2021

  1. Fixed security linter error 

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Commits on Nov 15, 2021

  1. GaussInputPattern + SpikeInputGenerator done. SpikeSource not running.

    gkarray committed Nov 15, 2021
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  2. Updated CI/CD based on lava-optimization 

    Signed-off-by: Mathis Richter <[email protected]>
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  3. Added pybuilder dependency 

    Signed-off-by: Mathis Richter <[email protected]>
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Commits on Nov 17, 2021

  1. First draft of a DNF 101 tutorial 

    Signed-off-by: Mathis Richter <[email protected]>
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Commits on Nov 18, 2021

  1. Added gauss() function

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  2. Added SelectiveKernel

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  3. Fixed linter error

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  4. Renamed bias_mant to bias in Population

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Commits on Nov 19, 2021

  1. Added MultiPeakKernel

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  2. Updated example in README to new API

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  3. SpikeInput refactoring (wip)

    gkarray committed Nov 19, 2021
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  4. Merge remote-tracking branch 'origin/main' into inputs

    gkarray committed Nov 19, 2021
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  5. GaussPattern + SpikeGenerator. Missing unit tests and documentation.

    gkarray committed Nov 19, 2021
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  6. Merge branch 'main' of https://github.com/mathisrichter/lava-dnf into… 

    … tutorial_dnf
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  7. Updated the DNF 101 tutorial 

    This makes assumptions about future changes to inputs and monitors.
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  8. Reordered sections of DNF tutorial and fixed minor issues

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Commits on Nov 21, 2021

  1. Documentation + refactor GaussPattern param validation + fixing linti… 

    …ng errors.
    gkarray committed Nov 21, 2021
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  2. Restructuring inputs directory

    gkarray committed Nov 21, 2021
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Commits on Nov 22, 2021

  1. Unit testing.

    gkarray committed Nov 22, 2021
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  2. Temporary placeholder for missing ReshapePorts

    @mathisrichter
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  3. Adding parameters to SpikeGenerator + refactoring unit tests.

    gkarray committed Nov 22, 2021
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  4. Merge pull request #1 from mathisrichter/inputs 

    Added spike input generator
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  5. Merge branch 'tutorial_dnf'

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  6. Skipping unit tests that have non-deterministic behavior

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  7. Skipping unit tests that have non-deterministic behavior

    @mathisrichter
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  8. Changed __init__.py files to new Lava convention

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  9. Removed one more __init__.py file

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Commits on Nov 23, 2021

  1. Removed two more __init__.py files

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  2. Updated tutorial after feedback

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  3. Fixed non-determinism in unit tests (#3) 

    Co-authored-by: gkarray <[email protected]>
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    gkarray and gkarray committed Nov 23, 2021
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  4. Update requirements.txt (#2)

    @mgkwill
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  5. Merge branch 'main' of https://github.com/mathisrichter/lava-dnf into… 

    … v0.1.0
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  6. Merge branch 'v0.1.0' of https://github.com/mathisrichter/lava-dnf in… 

    …to v0.1.0
    @mathisrichter
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  7. Fixed bugs in tutorial

    @mathisrichter
    mathisrichter committed Nov 23, 2021
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  8. Update requirements.txt

    @mgkwill
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  9. Update build.py 

    Add project.build_depends_on("lava", url="git+https://github.com/lava-nc/lava.git) to build.py
    @mgkwill
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  10. ci-build.yml: Only run unit tests on Windows

    @mgkwill
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  11. Update ci-build.yml

    @mgkwill
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  12. Moved unit tests to be consistent with lava test directory structure

    @mathisrichter
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  13. Replaced np.bool/np.int with bool/int

    @mathisrichter
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  14. Replaced tau parameters with decay

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    mathisrichter committed Nov 23, 2021
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Commits on Nov 24, 2021

  1. Added complete type annotations

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  2. Capitalized comments

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  3. Merge branch 'v0.1.0' of https://github.com/mathisrichter/lava-dnf in… 

    …to v0.1.0
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  4. Removed Population Process and replaced it with LIF

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  5. Addressing pending error, RuntimeWarning and adding few comments.

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  6. Merge branch 'v0.1.0' of https://github.com/mathisrichter/lava-dnf in… 

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  7. Update ci-build.yml

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  8. Added preliminary but working raster plot

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    mathisrichter committed Nov 24, 2021
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  9. Updated tutorial to include Monitors and raster plots

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  10. Merge branch 'v0.1.0' of https://github.com/mathisrichter/lava-dnf in… 

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  11. Cosmetic changes to visible documents

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Commits on Nov 25, 2021

  1. Updated tutorial to work with new Dense implementations

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  2. Split off examples from DNF 101 tutorial

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    mathisrichter committed Nov 25, 2021
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  3. Docstring cosmetics

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  4. Minor correction in RateCodeSpikeGen + restructure and unit testing p… 

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    gkarray committed Nov 25, 2021
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  5. Merge branch 'v0.1.0' of https://github.com/mathisrichter/lava-dnf in… 

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� Conflicts:
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  6. Operations in connect function are now optional

    @mathisrichter
    mathisrichter committed Nov 25, 2021
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  7. Merge branch 'v0.1.0' of https://github.com/mathisrichter/lava-dnf in… 

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  8. Fixed linter errors

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    mathisrichter committed Nov 25, 2021
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  9. Homogenizing asserts in plotting's unit tests.

    gkarray committed Nov 25, 2021
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  10. Reverting plotting functions to old (num_time_steps, num_neurons) sha… 

    …pe convention
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  11. Refactoring tutorial_dnf_regimes.ipynb

    gkarray committed Nov 25, 2021
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  12. Adding colorbar to tutorial_dnf_regimes.ipynb plots.

    gkarray committed Nov 25, 2021
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Commits on Nov 26, 2021

  1. Updated tutorials

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  2. Adding animated plot for dnf_regimes tutorial

    gkarray committed Nov 26, 2021
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  3. Merge branch 'v0.1.0' of https://github.com/mathisrichter/lava-dnf in… 

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    gkarray committed Nov 26, 2021
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  4. Fixing linter errors.

    gkarray committed Nov 26, 2021
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  5. Updated animated plots and added them to DNF regime tutorial

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    mathisrichter committed Nov 26, 2021
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Commits on Nov 27, 2021

  1. Fixed unit tests that needed changes but were blocked by PR #96 

    Signed-off-by: Mathis Richter <[email protected]>
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Commits on Nov 29, 2021

  1. Removed tags from Process Models, anticipating changes in PR#96 

    Signed-off-by: Mathis Richter <[email protected]>
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  2. Fixed typo in tutorial 

    Signed-off-by: Mathis Richter <[email protected]>
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    mathisrichter committed Nov 29, 2021
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