Update gitpod.yml

miRTop · Nov 7, 2024 · 73e4eb0 · 73e4eb0
1 parent 55e8fbc
commit 73e4eb0
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/.gitpod.yml b/.gitpod.yml
@@ -9,5 +9,7 @@ tasks:
       bash ~/miniconda.sh -b -p ~/mirtop_env
       conda config --set ssl_verify false  # For Gitpod compatibility
       conda install anaconda-client -y
-      conda install -c bioconda samtools
-      pip install pytest pyyaml six pysam pybedtools pandas biopython
+      conda install -c bioconda samtools pybedtools -y
+      pip install pytest pyyaml six pysam pandas biopython
+    command: |
+      python setup.py develop