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76 Open 782 Closed
76 Open 782 Closed
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Issues list

"Failed to call external services." error
#987 opened Nov 12, 2024 by ThibauldMichel
3
List contents of a cart file?
#969 opened Sep 24, 2024 by amstilp
1
Required firewall rules for SRA toolkit
#959 opened Aug 20, 2024 by MaxDegenerEvotec
Building against HDF5/1.14.4.3
#958 opened Aug 20, 2024 by pgrt
1
Feature suggestion: option in fasterq-dump to output the FASTQ files already gzipped
#956 opened Aug 14, 2024 by fantauzzi
no clip option for fasterq-dump
#952 opened Jul 23, 2024 by paulzierep
2
fastq-dump/fasterq-dump: can't open JTFH01xxxxxx as a RefSeq or as a WGS
#946 opened Jul 13, 2024 by sa2adeel
27
vdb-config: use AWS IAM role instead of credentials file
#945 opened Jul 4, 2024 by peter-sandor-1992
1
fasterq-dump into six files?
#944 opened Jul 1, 2024 by jeongyeonkim95
1
error code 3 for some nanopore datasets
#943 opened Jun 27, 2024 by yfukasawa
1
Unresolved dependencies with prefetch followed by fatal segmentation fault error
#940 opened Jun 12, 2024 by guester
1
vdb-config
#936 opened May 8, 2024 by anjilsri
1
prefetch - failed to verify error
#920 opened Mar 23, 2024 by uasic
26
Prefetch SSL Certificate Verification Error in NCBI SRA Toolkit
#905 opened Feb 1, 2024 by angerray
5
fasterq-dump overloads memory
#903 opened Jan 29, 2024 by mfansler
13
fasterq-dump quit with error code 3; err: the input data is missing the QUALITY-column
#902 opened Jan 28, 2024 by huang-juanjuan
fasterq-dump: cannot create this file, full path is changed with _1 and _2
#899 opened Jan 25, 2024 by lindenb
1
How to check the integrity of BAM and FASTQ files after conversion
#890 opened Dec 14, 2023 by zhuchcn
4
Numerous scRNA-seq Datasets Having Potential Corruption Issues Upon Conversion to .SRA Format
#889 opened Dec 14, 2023 by Sandman-1
1
fastq-dump error in MacOs
#885 opened Nov 27, 2023 by nana-marinbio
Fasterq-dump downloading temp files more than double the size of the original FASTQ files.
#869 opened Oct 28, 2023 by Vishnu-Prasad-O
fasterq-dump fails due to output file naming error
#865 opened Oct 16, 2023 by dmalzl
8
consider adding a flake.nix
#854 opened Sep 30, 2023 by MatrixManAtYrService
CentOS binaries: dump-ref-fasta executable built only(?) for CentOS (>= 8)
#852 opened Sep 11, 2023 by HenrikBengtsson
3
"fasterq-dump.3.0.7 err: the input data is missing the QUALITY-column" BUT sra QUALITY column is present.
#851 opened Sep 8, 2023 by GabeAl
1
ProTip! no:milestone will show everything without a milestone.