Skip to content

Moved the verbose for nf-core modules test #7496

Moved the verbose for nf-core modules test

Moved the verbose for nf-core modules test #7496

Triggered via pull request August 15, 2024 07:50
Status Success
Total duration 15m 4s
Artifacts 51

pytest.yml

on: pull_request
Matrix: setup
Get test file matrix
9s
Get test file matrix
Matrix: test
Fit to window
Zoom out
Zoom in

Annotations

105 warnings
Get test file matrix
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_version_consistency.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_version_consistency.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_nfcore_yml.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_nfcore_yml.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_merge_markers.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_merge_markers.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_list.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_list.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_refgenie.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_refgenie.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_modules_json.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_modules_json.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_template_strings.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_template_strings.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_actions_awstest.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_actions_awstest.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_configs.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_configs.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_files_unchanged.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_files_unchanged.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_create.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_create.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_actions_awsfulltest.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_actions_awsfulltest.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_remove.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_remove.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_actions_ci.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_actions_ci.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_params_file.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_params_file.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_download.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_download.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_files_exist.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_files_exist.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run subworkflows/test_create.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run subworkflows/test_create.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_create_logo.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_create_logo.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run subworkflows/test_list.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run subworkflows/test_list.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_actions_schema_validation.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_actions_schema_validation.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_bump_versions.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_bump_versions.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_patch.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_patch.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_multiqc_config.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/lint/test_multiqc_config.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_lint.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_lint.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_cli.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_cli.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_list.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_list.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_bump_version.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_bump_version.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_sync.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_sync.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_create.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_create.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_install.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_install.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run subworkflows/test_remove.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run subworkflows/test_remove.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run subworkflows/test_info.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run subworkflows/test_info.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_info.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_info.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_subworkflows.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_subworkflows.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_nextflow_config.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/lint/test_nextflow_config.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_test_utils.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_test_utils.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run subworkflows/test_install.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run subworkflows/test_install.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_modules.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_modules.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_modules_json.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_modules_json.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_launch.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_launch.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_pipelines.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_pipelines.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_lint_utils.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_lint_utils.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_create_app.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_create_app.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run pipelines/test_schema.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run pipelines/test_schema.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run subworkflows/test_lint.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run subworkflows/test_lint.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_utils.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run test_utils.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_update.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_update.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run modules/test_lint.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run modules/test_lint.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run subworkflows/test_update.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
Run subworkflows/test_update.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_components.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
Run test_components.py with Python 3.8 on ubuntu-latest
The process '/usr/bin/git' failed with exit code 128
coverage
Codecov: Failed to properly create commit: The process '/home/runner/work/_actions/codecov/codecov-action/5ecb98a3c6b747ed38dc09f787459979aebb39be/dist/codecov' failed with exit code 1
coverage
The process '/usr/bin/git' failed with exit code 128

Artifacts

Produced during runtime
Name Size
coverage_modules__test_bump_versions.py
5.62 KB
coverage_modules__test_create.py
5.57 KB
coverage_modules__test_info.py
5.7 KB
coverage_modules__test_install.py
5.64 KB
coverage_modules__test_lint.py
6.84 KB
coverage_modules__test_list.py
5.68 KB
coverage_modules__test_modules_json.py
5.76 KB
coverage_modules__test_patch.py
5.84 KB
coverage_modules__test_remove.py
5.66 KB
coverage_modules__test_update.py
5.88 KB
coverage_pipelines__lint__test_actions_awsfulltest.py
6.35 KB
coverage_pipelines__lint__test_actions_awstest.py
6.35 KB
coverage_pipelines__lint__test_actions_ci.py
6.35 KB
coverage_pipelines__lint__test_actions_schema_validation.py
6.35 KB
coverage_pipelines__lint__test_configs.py
6.36 KB
coverage_pipelines__lint__test_files_exist.py
6.37 KB
coverage_pipelines__lint__test_files_unchanged.py
6.37 KB
coverage_pipelines__lint__test_merge_markers.py
6.35 KB
coverage_pipelines__lint__test_modules_json.py
6.35 KB
coverage_pipelines__lint__test_multiqc_config.py
6.4 KB
coverage_pipelines__lint__test_nextflow_config.py
6.39 KB
coverage_pipelines__lint__test_nfcore_yml.py
6.35 KB
coverage_pipelines__lint__test_template_strings.py
6.64 KB
coverage_pipelines__lint__test_version_consistency.py
6.4 KB
coverage_pipelines__test_bump_version.py
5.1 KB
coverage_pipelines__test_create.py
5.06 KB
coverage_pipelines__test_create_app.py
5.08 KB
coverage_pipelines__test_create_logo.py
5.07 KB
coverage_pipelines__test_download.py
5.45 KB
coverage_pipelines__test_launch.py
5.24 KB
coverage_pipelines__test_lint.py
6.8 KB
coverage_pipelines__test_list.py
4.97 KB
coverage_pipelines__test_params_file.py
5.14 KB
coverage_pipelines__test_refgenie.py
5 KB
coverage_pipelines__test_schema.py
5.16 KB
coverage_pipelines__test_sync.py
5.17 KB
coverage_subworkflows__test_create.py
6.4 KB
coverage_subworkflows__test_info.py
6.5 KB
coverage_subworkflows__test_install.py
6.46 KB
coverage_subworkflows__test_lint.py
6.62 KB
coverage_subworkflows__test_list.py
6.49 KB
coverage_subworkflows__test_remove.py
6.5 KB
coverage_subworkflows__test_update.py
6.59 KB
coverage_test_cli.py
6.76 KB
coverage_test_components.py
5.33 KB
coverage_test_lint_utils.py
4.94 KB
coverage_test_modules.py
5.55 KB
coverage_test_pipelines.py
4.95 KB
coverage_test_subworkflows.py
6.23 KB
coverage_test_test_utils.py
4.95 KB
coverage_test_utils.py
5.11 KB