Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Template: handle template features with a yaml file #3108

Merged
merged 12 commits into from
Aug 13, 2024
Merged

Template: handle template features with a yaml file #3108

merged 12 commits into from
Aug 13, 2024

Commits on Aug 8, 2024

  1. handle template features with a yaml file

    @mirpedrol
    mirpedrol committed Aug 8, 2024
    Configuration menu
    Copy the full SHA
    8acb9c4 View commit details
    Browse the repository at this point in the history

  2. [automated] Update CHANGELOG.md

    @nf-core-bot
    nf-core-bot committed Aug 8, 2024
    Configuration menu
    Copy the full SHA
    637317a View commit details
    Browse the repository at this point in the history

Commits on Aug 9, 2024

  1. use template features yaml file to generate textual layout

    @mirpedrol
    mirpedrol committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    efff9ea View commit details
    Browse the repository at this point in the history

  2. update textual snapshots

    @mirpedrol
    mirpedrol committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    2fa7a03 View commit details
    Browse the repository at this point in the history

  3. try reading yaml keys with a list format

    @mirpedrol
    mirpedrol committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    a009e68 View commit details
    Browse the repository at this point in the history

Commits on Aug 12, 2024

  1. don't read from json on matrix creation

    @mirpedrol
    mirpedrol committed Aug 12, 2024
    Configuration menu
    Copy the full SHA
    e36bd7f View commit details
    Browse the repository at this point in the history

Commits on Aug 13, 2024

  1. Merge branch 'dev' of https://github.com/nf-core/tools into template-… 

    …customisation-yaml-file
    @mirpedrol
    mirpedrol committed Aug 13, 2024
    Configuration menu
    Copy the full SHA
    6c40d09 View commit details
    Browse the repository at this point in the history

  2. apply suggestions from code review by @mashehu

    @mirpedrol
    mirpedrol committed Aug 13, 2024
    Configuration menu
    Copy the full SHA
    78c64c7 View commit details
    Browse the repository at this point in the history

  3. load feature yaml file with a utils function

    @mirpedrol
    mirpedrol committed Aug 13, 2024
    Configuration menu
    Copy the full SHA
    bf07bf2 View commit details
    Browse the repository at this point in the history

  4. set force to true when creating a pipeline from the app

    @mirpedrol
    mirpedrol committed Aug 13, 2024
    Configuration menu
    Copy the full SHA
    2c2ec5d View commit details
    Browse the repository at this point in the history

  5. Update nf_core/pipelines/create/utils.py 

    Co-authored-by: Matthias Hörtenhuber <[email protected]>
    @mirpedrol @mashehu
    mirpedrol and mashehu committed Aug 13, 2024
    Configuration menu
    Copy the full SHA
    2535b6f View commit details
    Browse the repository at this point in the history

  6. fix typing

    @mirpedrol
    mirpedrol committed Aug 13, 2024
    Configuration menu
    Copy the full SHA
    6af86cf View commit details
    Browse the repository at this point in the history